Publications by authors named "Julien Quere"

Phytoplankton supports food webs in all aquatic ecosystems. Ecological studies highlighted the links between environmental variables and species successions . However, the role of life cycle characteristics on phytoplankton community dynamics remains poorly characterized.

View Article and Find Full Text PDF
Article Synopsis
  • Dinoflagellates in this study are linked to harmful algal blooms and produce complex paralytic shellfish toxins (PSTs), making genetic identification challenging due to their large genomes.
  • A family-based genomic association study was conducted, revealing that toxin production is inherited Mendelian style, though heritability of toxin profiles is more intricate.
  • Key findings include identifying a genomic region associated with toxin production, discovering that relevant toxin-related genes are scattered instead of clustered, and suggesting new candidate genes for future research on toxin synthesis in dinoflagellates.
View Article and Find Full Text PDF
Article Synopsis
  • Despite expectations, marine microeukaryote populations like Alexandrium minutum show strong genetic structuring, which hasn't been fully explained yet.
  • Traditional genotyping methods require isolating clonal strains, complicating population sampling; however, using meta-transcriptome samples provides a novel approach to studying these populations.
  • Findings reveal significant genetic differentiation in A. minutum across Western Europe, with evidence of both ancient divergence and possible selective sweeps affecting genetic variation.
View Article and Find Full Text PDF

To evaluate the stability and resilience of coastal ecosystem communities to perturbations that occurred during the Anthropocene, pre-industrial biodiversity baselines inferred from paleoarchives are needed. The study of ancient DNA (aDNA) from sediments (sedaDNA) has provided valuable information about past dynamics of microbial species and communities in relation to ecosystem variations. Shifts in planktonic protist communities might significantly affect marine ecosystems through cascading effects, and therefore the analysis of this compartment is essential for the assessment of ecosystem variations.

View Article and Find Full Text PDF

Rhabdomyosarcoma of the larynx has been very rarely described in pediatric population. There are 3 histological subtypes: embryonal, pleomorphic, and alveolar. With regard to the English literature, we present the first case of alveolar rhabdomyosarcoma of the larynx ever described in a child.

View Article and Find Full Text PDF

Untangling the functional basis of divergence between closely related species is a step toward understanding species dynamics within communities at both the evolutionary and ecological scales. We investigated cellular (i.e.

View Article and Find Full Text PDF

Understanding divergence in the highly dispersive and seemingly homogeneous pelagic environment for organisms living as free drifters in the water column remains a challenge. Here, we analysed the transcriptome-wide mRNA sequences, as well as the morphology of 18 strains of Alexandrium minutum, a dinoflagellate responsible for harmful algal blooms worldwide, to investigate the functional bases of a divergence event. Analysis of the joint site frequency spectrum (JSFS) pointed towards an ancestral divergence in complete isolations followed by a secondary contact resulting in gene flow between the two diverging groups, but heterogeneous across sites.

View Article and Find Full Text PDF

The multiannual dynamic of the cyst-forming and toxic marine dinoflagellate Alexandrium minutum was studied over a time scale of about 150 years by a paleoecological approach based on ancient DNA (aDNA) quantification and cyst revivification data obtained from two dated sediment cores of the Bay of Brest (Brittany, France). The first genetic traces of the species presence in the study area dated back to 1873 ± 6. Specific aDNA could be quantified by a newly developed real-time PCR assay in the upper core layers, in which the germination of the species (in up to 17-19-year-old sediments) was also obtained.

View Article and Find Full Text PDF

The dinoflagellates of Alexandrium genus are known to be producers of paralytic shellfish toxins that regularly impact the shellfish aquaculture industry and fisheries. Accurate detection of Alexandrium including Alexandrium minutum is crucial for environmental monitoring and sanitary issues. In this study, we firstly developed a quantitative lateral flow immunoassay (LFIA) using super-paramagnetic nanobeads for A.

View Article and Find Full Text PDF