Publications by authors named "Ju-Won Kim"

Purpose: This study aimed to develop a machine learning-based approach to identify prognostic gene signatures for early-stage Triple Negative Breast Cancer (TNBC) using next-generation sequencing data from Asian populations.

Materials And Methods: We utilized next-generation sequencing data to analyze gene expression profiles and identify potential biomarkers. Our methodology involved integrating various machine learning techniques, including feature selection and model optimization.

View Article and Find Full Text PDF

Background: The transcriptomic profile of cellular senescence is strongly associated with distinct cell types, the specific stressors triggering senescence, and temporal progression through senescence stages. This implies the potential necessity of conducting separate investigations for each cell type and a stressor inducing senescence. To elucidate the molecular mechanism that drives endoplasmic reticulum (ER) stress-induced cellular senescence in MCF-7 breast cancer cells, with a particular emphasis on the ATF6α branch of the unfolded protein response.

View Article and Find Full Text PDF
Article Synopsis
  • Breast cancer (BC) exhibits complex genomic changes, but the impact of age and ethnicity on its molecular variations is still not well understood.
  • This study analyzed 843 BC patients in the K-MASTER program, focusing on differences between age groups and comparing findings with larger genomic databases to uncover ethnic disparities.
  • Key results included a higher frequency of specific mutations in older patients and significant differences in cancer subtypes across ethnic groups, leading to the development of a model to predict responses to platinum-based chemotherapy based on unique molecular signatures.
View Article and Find Full Text PDF

Background: Taxanes are effective chemotherapy drugs for breast cancer care, but adverse effects pose a significant challenge in cancer treatment. Taxane-induced fluid retention and lower-extremity edema are two of the important dose-limiting toxicity and result in decreased quality of life (QoL). However, there is no standard of care to alleviate the symptoms.

View Article and Find Full Text PDF
Article Synopsis
  • EGFR-variant non-small cell lung cancer (NSCLC) is prone to central nervous system (CNS) metastases, making new treatment options like lazertinib important for improving patient outcomes.
  • This study was a phase 2 trial in South Korea involving patients with NSCLC and existing brain metastases who had not responded to first or second-generation EGFR inhibitors, assessing lazertinib's effectiveness.
  • Results showed a 55% intracranial objective response rate (iORR) for patients, with higher responses in those with specific genetic markers, indicating that lazertinib could be a promising option for treating CNS metastases in these patients.
View Article and Find Full Text PDF

Background: Advancements in the diagnosis, treatment, and surveillance of castration-resistant prostate cancer (CRPC) have progressed considerably, but a new biomarker that combines existing clinical and pathological data could be useful for a more precise diagnosis and prognosis. Some investigations have found that extracellular vesicle (EV)-derived miRNAs play crucial roles in various types of malignant tumors. The objective of this study was to explore EV miRNA and identify its biologic function as a biomarker for the diagnosis and prognosis of CRPC.

View Article and Find Full Text PDF

Prohibitin 1 (PHB1) is ubiquitously expressed in multiple compartments within cells and is involved in the cell cycle, cell signaling, apoptosis, transcriptional regulation, and mitochondrial biogenesis at the cellular level and in the inflammation-associated and immunological functions of B and T lymphocytes. PHB1 is an important protein that performs antioxidant regulation and immune functions inside and outside cells but has not been sufficiently studied in teleost fish. Our study aimed to elucidate the functional properties and gain new insights into the biological processes and immune system of red seabream (Pagrus major), a commercially important fish cultured in South Korea and East Asia.

View Article and Find Full Text PDF
Article Synopsis
  • Tension members are crucial for the stability and strength of various structures, and their use has expanded into areas like subsea and aerospace applications.
  • Continuous monitoring of these tension members is essential due to risks of abnormal tensile strength that could lead to structural failure.
  • This study introduces a yoke-type elasto-magnetic sensor for effective nondestructive tension monitoring, demonstrating its capability to accurately estimate tension force through measured induced voltage signals.
View Article and Find Full Text PDF
Article Synopsis
  • The study focuses on the EFEMP2 protein in the olive flounder, which plays a key role in connective tissue development and tumor growth.
  • Researchers characterized the cDNA of this protein, finding similarities to other fish species and identifying its highest expression in tissues like the heart and ovary.
  • The disruption of EFEMP2 using CRISPR/Cas9 showed that it is involved in antiviral responses, as knockout cells had increased levels of viral and immune-related gene expressions after a viral infection.
View Article and Find Full Text PDF

A Gram-stain-positive, aerobic bacterium, designated as YPD9-1, was isolated from the gut contents of a spotty belly greenling, , collected near Dokdo island, South Korea. The rod-shaped cells were oxidase-positive, and catalase-negative. The major cellular fatty acids were anteiso-C, iso-C, C, iso-C and iso-C.

View Article and Find Full Text PDF

Urethane acrylate (UA) was synthesized from various di-polyols, such as poly(tetrahydrofuran) (PTMG, Mn = 1000), poly(ethylene glycol) (PEG, Mn = 1000), and poly(propylene glycol) (PPG, Mn = 1000), for use as a polymer binder for paint. Polymethyl methacrylate (PMMA) and UA were blended to form an acrylic resin with high transmittance and stress-strain curve. When PMMA was blended with UA, a network structure was formed due to physical entanglement between the two polymers, increasing the mechanical properties.

View Article and Find Full Text PDF
Article Synopsis
  • Triple-negative breast cancer (TNBC) has a worse prognosis than other breast cancer types and lacks reliable biomarkers to predict patient outcomes.
  • This study analyzed gene expressions from 184 TNBC patient samples using RNA sequencing, identifying a 10-gene signature that accurately predicts invasive disease-free survival.
  • The 10-gene signature shows strong sensitivity and specificity, and it may enhance personalized treatment approaches for TNBC patients by serving as a novel prognostic biomarker.
View Article and Find Full Text PDF

Myostatin (MSTN, also known as growth differentiation factor-8 (GDF-8)), a member of the transforming growth factor β (TGF-β) superfamily, functions as a negative regulator of skeletal muscle development and growth. However, it is also expressed in a wide range of tissues in fish and thus may have more diverse roles in this group than in mammals. In this study, we assessed the genome-wide transcriptional expression pattern associated with the CRISPR/Cas9-mutated MSTN gene in the olive flounder (Paralichthys olivaceus) in association with changes in cell proliferation and transportation processes.

View Article and Find Full Text PDF
Article Synopsis
  • Paclitaxel is a second-line treatment for advanced gastric cancer (AGC), but there are currently no biomarkers to predict which patients will benefit from it.
  • This study analyzed data from 288 AGC patients treated with paclitaxel from 2017-2022 using various machine learning models to create a prediction system for patient outcomes.
  • The best-performing model, an artificial neural network with genetic embedding, showed improved predictive accuracy, helping to identify patients who might achieve better progression-free survival with paclitaxel therapy.
View Article and Find Full Text PDF
Article Synopsis
  • This study investigates the effectiveness of electric massage chairs (EMC) in reducing chemotherapy-induced nausea and vomiting (CINV) in cancer patients, as these side effects can significantly impact their quality of life.* -
  • A randomized trial involved 59 solid cancer patients, who were treated in either a standard bed or an EMC during chemotherapy, with questionnaires assessing CINV and quality of life.* -
  • Results showed no significant difference in overall CINV scores between the two groups, but EMC may still be beneficial for specific high-risk subgroups, suggesting potential value in improving quality of life for those patients.*
View Article and Find Full Text PDF

Background: Immune-modulating antibodies targeting programmed cell death protein 1/programmed death-ligand 1 (PD-1/PD-L1) have demonstrated promising antitumor efficacy in various types of cancers, especially highly mutated ones. Genetic alterations in DNA damage response and repair (DDR) genes can lead to genetic instability, often accompanied by a high tumor mutation burden (TMB). However, few studies have validated the aberration of DDR genes as a predictive biomarker for response to immune-modulating antibodies.

View Article and Find Full Text PDF

Red sea bream iridovirus (RSIV) is a highly contagious viral infection that affects various fish species and poses a significant threat to the global aquaculture industry. Thus, accurate and timely diagnosis is paramount for sustainable management of fish health. This study rigorously evaluated the diagnostic efficacy of various polymerase chain reaction (PCR) assays, focusing on those recommended by the World Organization for Animal Health (WOAH) and the assays newly proposed by WOAH's Aquatic Animals Health Standards Commission.

View Article and Find Full Text PDF
Article Synopsis
  • This study evaluates the efficacy of a combination treatment (ABCP) involving atezolizumab, bevacizumab, paclitaxel, and carboplatin for patients with non-small-cell lung cancer who have progressed after tyrosine kinase inhibitor therapy.
  • The results show that the ABCP treatment led to significantly better objective response rates and progression-free survival compared to the traditional treatment (PC), particularly in patients with higher PD-L1 expression.
  • Overall survival rates were similar between both treatment groups, and while ABCP had a comparable safety profile, it was associated with higher rates of treatment-related side effects compared to the PC arm.
View Article and Find Full Text PDF

We explored the biotechnological applicability of a previously established olive flounder (Paralichthys olivaceus) embryonic cell line (FGBC8). FGBC8 was transfected with pEGFP-c1 and pluripotency-related genes, then infected with viral hemorrhagic septicemia virus (VHSV), and the expression of immune-related genes was observed through quantitative real-time polymerase chain reaction. Transfected cells showed strong green fluorescence 48 h after transfection, and pluripotency-related genes were successfully transfected.

View Article and Find Full Text PDF
Article Synopsis
  • The L1 cell adhesion molecule (L1CAM) sequence from the starry flounder was obtained and verified through next-generation sequencing techniques.
  • The study found that PsL1CAM mRNA was expressed across various tissues in healthy starry flounders, with notable changes in expression observed after infections with viral hemorrhagic septicemia virus (VHSV) and Streptococcus parauberis PH0710.
  • In response to VHSV infection, PsL1CAM mRNA levels increased in most tissues but decreased in mucosal-associated lymphoid tissues; likewise, after S. parauberis PH0710 infection, expression generally rose except in the heart, suggesting PsL1CAM's role in the fish's immune
View Article and Find Full Text PDF

Rationale And Objectives: To investigate whether machine learning (ML) approaches using breast magnetic resonance imaging (MRI)-derived multiparametric and radiomic features could predict axillary lymph node metastasis (ALNM) in stage I-II triple-negative breast cancer (TNBC).

Materials And Methods: Between 2013 and 2019, 86 consecutive patients with TNBC who underwent preoperative MRI and surgery were enrolled and divided into ALNM (N = 27) and non-ALNM (n = 59) groups according to histopathologic results. For multiparametric features, kinetic features using computer-aided diagnosis (CAD), morphologic features, and apparent diffusion coefficient (ADC) values at diffusion-weighted images were evaluated.

View Article and Find Full Text PDF

Background: Salivary duct carcinoma (SDC) is uncommon but is the most aggressive subtype of salivary gland carcinomas. The high positivity rate for human epidermal growth factor receptor 2 (HER2) led to an investigation of the efficacy of HER2-targeted agents. Docetaxel-PM (polymeric micelle) is a low-molecular-weight, nontoxic, biodegradable, and docetaxel-loaded micellar formulation.

View Article and Find Full Text PDF

High-grade serous ovarian carcinoma (HGSOC) is a fatal gynecological malignancy. Somatic recombination occurring during T-cell receptor (TCR) development results in TCR diversity, and the TCR repertoire, thus produced, is associated with immune response. This study analyzed the difference in the TCR repertoire and their prognostic significance in 51 patients with HGSOC.

View Article and Find Full Text PDF

Triol acrylic-urethane (t-AU) was synthesized from an addition reaction using trimethylolpropane, hexamethylene diisocyanate, and 2-hydroxyethyl methacrylate. The novel acrylic-urethane polymer was applied to a high-performance binder to prepare a reliable road marking paint. Acrylic-urethane polymer binder formulations were designed to optimize the effect of t-AU on the physical properties.

View Article and Find Full Text PDF

Background: Although various coronavirus disease 2019 (COVID-19) vaccines have been delivered to the public worldwide, data on cancer populations are limited. Vaccine hesitancy related to safety concerns is observed among cancer patients. We report the perception of COVID-19 vaccines and their safety profile after vaccination among cancer patients.

View Article and Find Full Text PDF