Publications by authors named "Joshua Ames"

Article Synopsis
  • RNA viruses trigger immunity when RIG-I-like receptors (RLRs) detect viral RNA, but only a few infected cells show immune activation.
  • During West Nile virus infections, specific accumulation of negative-sense viral RNA (-vRNA) activates the immune response, with RIG-I engaging more with -vRNA.
  • Flaviviruses hide -vRNA in replication compartments, but in "first responder" cells, some -vRNA is released later in infection, which is essential for starting innate immunity.
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Article Synopsis
  • Organisms need to balance strong immune responses against infections with avoiding damage caused by an overactive immune system, especially in the central nervous system (CNS), which is sensitive to such issues.
  • The research highlights the importance of the protein IL-33 and its receptor ST2 for survival during neuroinvasive flavivirus infections, with oligodendrocytes producing IL-33 and microglia responding to it.
  • Without the effective IL-33/ST2 signaling, infections can lead to harmful recruitment of peripheral immune cells, increased stress on neurons, and ultimately, cell death, affecting overall survival.
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  • - The study investigates the effects of reinfection by the herpes simplex virus-1 (HSV-1), a DNA virus that can cause serious human diseases, particularly eye infections, and highlights a lack of understanding about how these reinfections happen.
  • - Researchers focused on the role of heparanase (HPSE), an enzyme that, when expressed after an initial HSV-1 infection, influences the local inflammatory response and promotes conditions conducive to disease.
  • - The findings show that while HSV-1 reinfection leads to significant disease in normal mice, mice lacking HPSE exhibited stronger immunity, showcasing that disabling HPSE could reduce disease severity by enhancing immune responses and protecting infected cells.
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Article Synopsis
  • Organisms need to balance strong immune responses against pathogens while preventing damage from their own immune activity, which is especially crucial in the central nervous system (CNS).
  • The study highlights the role of the alarmin IL-33 and its receptor ST2 in protecting against neuroinvasive flavivirus infections, with oligodendrocytes producing IL-33 and microglia responding to it.
  • Without proper IL-33/ST2 signaling, the brain faced harmful immune responses leading to increased stress and death of neuronal cells, ultimately reducing survival chances during infection.
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  • - ADAR1 is an RNA-editing enzyme that prevents the immune system from mistakenly attacking the body's own RNA, and a mutation in its Z-DNA-binding domain (ZBD) is linked to severe autoinflammatory diseases.
  • - The activation of ZBP1, the only other protein with a ZBD in mammals, contributes to the pathology observed with ADAR1 mutation by initiating cell death and inflammation through specific cellular pathways.
  • - Research shows that removing ZBP1 can alleviate symptoms caused by the ADAR1 mutation, highlighting that ADAR1 acts as a negative regulator of ZBP1, thus playing a crucial role in controlling autoinflammatory responses.
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Acyclovir and similar nucleoside analogs form an essential frontline treatment for various herpesvirus infections of the eye. However, these drugs have low ocular retention when delivered topically and need to be administered several times every day. We have previously demonstrated that acyclovir loaded into activated carbon can be used to significantly decrease dosage frequency in a murine model of ocular infection.

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Very little knowledge exists on virus-specific host cell intrinsic mechanisms that prevent hyperproliferation of primary HSV type 2 (HSV-2) genital infections. In this study, we provide evidence that the Nemo-related protein, optineurin (OPTN), plays a key role in restricting HSV-2 infection both in vitro and in vivo. Contrary to previous reports regarding the proviral role of OPTN during Sendai virus infection, we demonstrate that lack of OPTN in cells causes enhanced virus production.

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Article Synopsis
  • HSV-1 primarily causes infections in the eyes and mouth, but can occasionally lead to severe complications like encephalitis, resulting in brain damage or death.
  • The study identifies the mammalian target of rapamycin complex 2 (mTORC2) as crucial for the survival of animals infected with HSV-1, as its absence hampers immune responses and causes increased cell death.
  • mTORC2 helps protect cells by inactivating the pro-apoptotic factor FoxO3a, highlighting its role in enhancing the body’s defenses against viral infections.
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Fast-replicating neurotropic herpesviruses exemplified by herpes simplex virus-1 (HSV-1) naturally infect the central nervous system (CNS). However, most individuals intrinsically suppress the virus during a primary infection and preclude it from significantly damaging the CNS. Optineurin (OPTN) is a conserved autophagy receptor with little understanding of its role in neurotropic viral infections.

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Article Synopsis
  • A novel SARS-CoV-2 virus has led to a global pandemic, prompting a search for treatment methods to prevent its spread.
  • Understanding how the virus enters cells can aid in developing entry inhibitors, specifically targeting the ACE2 and heparan sulfate receptors.
  • Research shows that cationic peptides G1 and G2 can effectively inhibit virus entry by interacting with these receptors and reducing heparan sulfate levels on cell surfaces.
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  • Herpes simplex virus-1 (HSV-1) can cause serious conditions like eye lesions and brain infections, but the impact of genetic differences in the virus on disease severity and immune response is not fully understood.
  • The study involved analyzing genetic variations of HSV-1 strains from patients, using animal models and advanced techniques to explore how these differences affect immune responses and ocular damage.
  • Findings reveal that specific mutations in HSV-1 affect how the virus enters host cells and prompts immune reactions, potentially leading to more severe diseases and influencing treatment outcomes.
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The drive to withstand environmental stresses and defend against invasion is a universal trait extant in all forms of life. While numerous canonical signaling cascades have been characterized in detail, it remains unclear how these pathways interface to generate coordinated responses to diverse stimuli. To dissect these connections, we followed heparanase (HPSE), a protein best known for its endoglycosidic activity at the extracellular matrix but recently recognized to drive various forms of late-stage disease through unknown mechanisms.

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Herpesviruses are ubiquitous human pathogens that tightly regulate many cellular pathways including the unfolded protein response to endoplasmic reticulum (ER) stress. Pharmacological modulation of this pathway results in the inhibition of viral replication. In this study, we tested 4-phenylbutyrate (PBA), a chemical chaperone-based potent alleviator of ER stress, for its effects on herpes simplex virus (HSV) type 1 infection.

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Herpes simplex virus (HSV) is among the most prevalent viral infections worldwide and remains incurable. While nucleoside analogs are used to relieve symptoms of infection, they suffer from having serious adverse effects and are unable to abolish the virus from the host. Here, we demonstrate a unique antiviral effect of prodigiosin (PG), a natural secondary metabolite produced by , on HSV infection.

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Purpose: To evaluate the prophylactic antiviral efficacy, corneal tolerance and toxicity of topically dosed BX795, a non-nucleoside small-molecule inhibitor of herpes simplex virus type-1 (HSV-1).

Methods: Prophylactic treatment with BX795 was performed both in-vitro on human corneal epithelial cells and in-vivo on mice prior to HSV-1 challenge. Viral burden was evaluated using a standard plaque assay.

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Current drug-delivery systems are designed primarily for parenteral applications and are either lipid or polymer drug conjugates. In our quest to inhibit herpes simplex virus infection via the compounds found in commonly used cosmetic products, we found that activated carbon particles inhibit infection and, in addition, substantially improve topical delivery and, hence, the efficacy of a common antiviral drug, acyclovir (ACV). Our in vitro studies demonstrate that highly porous carbon structures trapped virions, blocked infection and substantially improved efficacy when ACV was loaded onto them.

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Herpes simplex virus type 1 (HSV-1) causes recurrent mucocutaneous lesions in the eye that may advance to corneal blindness. Nucleoside analogs exemplified by acyclovir (ACV) form the primary class of antiherpetic drugs, but this class suffers limitations due to the emergence of viral resistance and other side effects. While studying the molecular basis of ocular HSV-1 infection, we observed that BX795, a commonly used inhibitor of TANK-binding kinase 1 (TBK1), strongly suppressed infection by multiple strains of HSV-1 in transformed and primary human cells, cultured human and animal corneas, and a murine model of ocular infection.

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Unlabelled: Herpes simplex virus 1 (HSV-1) remodels nuclear membranes during virus egress. Although the UL31 and UL34 proteins control nucleocapsid transit in infected cells, the molecular interactions required for their function are unclear. Here we report that the γ34.

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Effective inactivation of biosafety level 4 (BSL-4) pathogens is vital in order to study these agents safely. Gamma irradiation is a commonly used method for the inactivation of BSL-4 viruses, which among other advantages, facilitates the study of inactivated yet morphologically intact virions. The reported values for susceptibility of viruses to inactivation by gamma irradiation are sometimes inconsistent, likely due to differences in experimental protocols.

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