Publications by authors named "Joseph D Lutgring"

Importance: Multiplex molecular syndromic panels for diagnosis of urinary tract infection (UTI) lack clinical data supporting their use in routine clinical care. They also have the potential to exacerbate inappropriate antibiotic prescribing.

Objective: To describe the frequency of unspecified multiplex testing in administrative claims with a primary diagnosis of UTI in the Medicare population over time, to assess costs, and to characterize the health care professionals (eg, clinicians, laboratories, physician assistants, and nurse practitioners) and patient populations using these tests.

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Article Synopsis
  • Carbapenem-resistant Enterobacterales (CRE) and carbapenem-resistant Pseudomonas aeruginosa (CRPA) are serious public health threats, particularly those that produce carbapenemases, which makes them resistant to many antibiotics.
  • Analysis of data from the Antimicrobial Resistance Laboratory Network (AR Lab Network) from 2018 to 2022 revealed that among the tested isolates, 35% were single-carbapenemase producing (SCP) and only 1% were multiple-carbapenemase producing (MCP).
  • The proportion of MCP-CRE detections has shown a gradual increase, indicating the need for ongoing monitoring and research efforts to tackle these dangerous bacteria.
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and are frequent causes of healthcare-associated infections. Antimicrobial-resistant enterococci pose a serious public health threat, particularly vancomycin-resistant enterococci (VRE), for which treatment options are limited. The Centers for Disease Control and Prevention's Division of Healthcare Quality Promotion Sentinel Surveillance system conducted surveillance from 2018 to 2019 to evaluate antimicrobial susceptibility profiles and molecular epidemiology of 205 and 180 clinical isolates collected from nine geographically diverse sites in the United States.

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Article Synopsis
  • - The study focuses on the molecular characteristics of non-tuberculous mycobacteria (NTM) that can cause infections outside of the lungs, detailing a collection of 45 extrapulmonary isolates over a span of six months from various sites.
  • - Key findings revealed that the most frequently isolated species were Mycobacterium avium, Mycobacterium chelonae, and Mycobacterium fortuitum, with significant variations in sequence types and the presence of antimicrobial resistance genes in some isolates.
  • - The research emphasizes the need for ongoing surveillance to monitor the prevalence and resistance patterns of NTM, helping to identify emerging strains and improve understanding of their virulence factors.
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Ten isolates representing the top 10 ribotypes collected in 2016 through the Emerging Infections Program underwent long-read sequencing to obtain high-quality reference genome assemblies. These isolates are publicly available through the CDC & FDA Antibiotic Resistance Isolate Bank.

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2019–2020 at 6 US sites. Among 159 CRE cases in children (median age 5 years), CRE was isolated from urine for 131 (82.4%) and blood from 20 (12.

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Background: Understanding the epidemiology of carbapenem-resistant A. baumannii complex (CRAB) and the patients impacted is an important step toward informing better infection prevention and control practices and improving public health response.

Methods: Active, population-based surveillance was conducted for CRAB in 9 U.

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is a Gram-negative bacillus that can cause severe and difficult-to-treat healthcare-associated infections. can harbor mobile genetic elements carrying genes that produce carbapenemase enzymes, further limiting therapeutic options for infections. In the United States, the Antimicrobial Resistance Laboratory Network (AR Lab Network) conducts sentinel surveillance of carbapenem-resistant (CRAB).

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Carbapenem-resistant (CRE) are an urgent public health threat. Genomic sequencing is an important tool for investigating CRE. Through the Division of Healthcare Quality Promotion Sentinel Surveillance system, we collected CRE and carbapenem-susceptible (CSE) from nine clinical laboratories in the USA from 2013 to 2016 and analysed both phenotypic and genomic sequencing data for 680 isolates.

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Accurate antimicrobial susceptibility testing (AST) and reporting are essential for guiding appropriate therapy for patients and direction for public health prevention and control actions. A critical feature of AST reporting is the interpretation of AST results using clinical breakpoints for reporting as susceptible, susceptible-dose dependent, intermediate, or resistant. Breakpoints are subject to continuous adjustment and updating to best reflect current clinical data.

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Chlorhexidine bathing to prevent transmission of multidrug-resistant organisms has been adopted by many U.S. hospitals, but increasing chlorhexidine use has raised concerns about possible emergence of resistance.

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Selective or cascade reporting (SR/CR) of antimicrobial susceptibility testing (AST) results is a strategy for antimicrobial stewardship. SR/CR is often achieved by suppressing AST results of secondary drugs in electronic laboratory reports. We assessed the extent of SR/CR and its impact on cumulative antibiograms (CAs) in a large cohort of U.

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Background: Antimicrobial susceptibility testing (AST) is not routinely performed for Clostridioides difficile and data evaluating minimum inhibitory concentrations (MICs) are limited. We performed AST and whole genome sequencing (WGS) for 593 C. difficile isolates collected between 2012 and 2017 through the Centers for Disease Control and Prevention's Emerging Infections Program.

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Article Synopsis
  • The CDC's Emerging Infections Program studied carbapenem-resistant Pseudomonas aeruginosa (CRPA) in the U.S. from 2016 to 2018 through population and laboratory surveillance, collecting 1,019 isolates for analysis.
  • The study found high genetic diversity among the strains, with 336 different sequence types, and the majority (87.1%) of isolates exhibited mutations in the porin OprD, linked to carbapenem resistance.
  • While only a small percentage contained carbapenemase genes, many had non-carbapenemase β-lactamase genes, indicating that other resistance mechanisms also play a significant role in the spread of CRPA in the U.S.
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Article Synopsis
  • Carbapenem-resistant Enterobacterales (CRE) are mostly linked to healthcare settings but are increasingly being found in the community.* -
  • A study from January 2012 to December 2015 identified 1499 cases of CRE, with 10% classified as community-associated, primarily affecting White females and detected mostly in urine samples.* -
  • Some community-associated isolates contained carbapenemase genes, highlighting the need for ongoing surveillance of CRE outside healthcare environments to track their emergence.*
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Colistin is a last-resort antibiotic for multidrug-resistant Gram-negative infections. Recently, the ninth allele of the mobile colistin resistance () gene family, designated was reported. However, its clinical and public health significance remains unclear.

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Healthcare-associated carbapenem-resistant (CRAB) infections are a serious threat associated with global epidemic clones and a variety of carbapenemase gene classes. In this study, we describe the molecular epidemiology, including whole-genome sequencing analysis and antimicrobial susceptibility profiles of 92 selected, nonredundant CRAB collected through public health efforts in the United States from 2013 to 2017. Among the 92 isolates, the Oxford (OX) multilocus sequence typing scheme identified 30 sequence types (STs); the majority of isolates ( = 59, 64%) represented STs belonging to the international clonal complex 92 (CC92).

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Oral fluids offer a noninvasive sampling method for the detection of Abs. Quantification of IgA and IgG Abs in saliva allows studies of the mucosal and systemic immune response after natural infection or vaccination. We developed and validated an enzyme immunoassay (EIA) to detect and quantify salivary IgA and IgG Abs against the prefusion-stabilized form of the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) spike protein expressed in suspension-adapted HEK-293 cells.

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and with resistance to daptomycin and/or linezolid are emerging globally. We present the genomic characterization of daptomycin- and linezolid-resistant and surveillance isolates from the United States, 2013-2016. Daptomycin resistance was low among (2/364, 0.

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Carbapenem-resistant Enterobacterales (CRE) are a growing public health concern due to resistance to multiple antibiotics and potential to cause health care-associated infections with high mortality. Carbapenemase-producing CRE are of particular concern given that carbapenemase-encoding genes often are located on mobile genetic elements that may spread between different organisms and species. In this study, we performed phenotypic and genotypic characterization of CRE collected at eight U.

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Article Synopsis
  • * During a three-month pilot surveillance in 2017, 884 cases were identified, revealing a high annual incidence rate of 199.7 per 100,000 people, with most infections originating from urine.
  • * Nearly half of these infections were community-acquired, highlighting the need for ongoing monitoring and prevention strategies to manage ESBL-E cases and detect new strains.
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Background: Carbapenem-resistant Enterobacterales (CRE) are highly antibiotic-resistant bacteria. Whether CRE resistant only to ertapenem among carbapenems (ertapenem "mono-resistant") represent a unique CRE subset with regards to risk factors, carbapenemase genes, and outcomes is unknown.

Methods: We analyzed surveillance data from 9 CDC Emerging Infections Program (EIP) sites.

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