For infections that become endemic in a population, the process may appear stable over a long time scale, but stochastic fluctuations can lead to eventual disease extinction. We consider the effects of model parameters and of population heterogeneities upon the expected time to extinction for host-vector disease systems. We find that non-homogeneous host selection by vectors increases persistence times relative to the homogeneous case, and that the effect becomes even more marked when there are strong associations between particular groups of vectors and hosts.
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