Publications by authors named "Jiawen Shang"

Article Synopsis
  • Identifying the tumor bed (TB) after surgical removal of a tumor is essential for effective radiotherapy planning, but segmenting it from surrounding tissues using CT images poses significant challenges.
  • A new deep learning model enhances the delineation of TB by using prior tumor location information from both pre-operative and post-operative CT scans, improving accuracy in identifying treatment volumes.
  • The model demonstrated a significant improvement in segmenting TB, achieving a higher dice similarity coefficient compared to traditional methods and models without prior information, indicating better performance in clinical applications.
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Purpose: Volumetric modulated arc therapy (VMAT) is a new treatment modality in modern radiotherapy. To ensure the quality of the radiotherapy plan, a physics plan review is routinely conducted by senior clinicians; however, this process is less efficient and less accurate. In this study, a multi-task AutoEncoder (AE) is proposed to automate anomaly detection of VMAT plans for lung cancer patients.

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Psoriasis is characterized by keratinocyte (KC) hyperproliferation and inflammatory cell infiltration, but the mechanisms remain unclear. In an imiquimod-induced mouse psoriasiform model, p38 activity is significantly elevated in KCs and p38α specific deletion in KCs ameliorates skin inflammation. p38α signaling promotes KC proliferation and psoriasis-related proinflammatory gene expression during psoriasis development.

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Background: Currently, intensity-modulated radiation therapy (IMRT) is commonly used in radiotherapy clinics. However, designing a treatment plan with multiple beam angles depends on the experience of human planners, and is mostly achieved using a trial-and-error approach. It is preferrable but challenging to solve this issue automatically and mathematically using an optimization approach.

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In recent years, the Clustered Regularly Interspaced Short Palindromic Repeats (CRISPR)-based genome editing toolkit has been widely used to modify the genome sequence of organisms. As the CRISPR toolbox continues to grow and new CRISPR-associated (Cas) proteins are discovered, its applications have expanded beyond conventional genome editing. This now encompass epigenetic editing, gene expression control, and various other functions.

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Purpose: Brain metastasis is a common, life-threatening neurological problem for patients with cancer. Single-isocenter volumetric modulated arc therapy (VMAT) has been popularly used due to its highly conformal dose and short treatment time. Accurate prediction of its dose distribution can provide a general standard for evaluating the quality of treatment plan.

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Background: Cine-magnetic resonance imaging (MRI) is currently used in real-time tumor tracking during magnetic resonance (MR)-guided radiotherapy. As a type of MRI specified for motion tracking, a few minutes' acquisition results in thousands of 2-dimensional (2D) images. For MR-guided radiotherapy consisting of multiple treatment fractions, the large number of cine-MRI images would be disproportionate to the tight clinical data storage available.

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Background: Magnetic resonance imaging (MRI) is currently used for online target monitoring and plan adaptation in modern image-guided radiotherapy. However, storing a large amount of data accumulated during patient treatment becomes an issue. In this study, the feasibility to compress MRI images accumulated in MR-guided radiotherapy using video encoders was investigated.

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Purpose: Treatment plans are used for patients under radiotherapy in clinics. Before execution, these plans are checked for safety and quality by human experts. A few of them were identified with flaws and needed further improvement.

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