In recent years, the automatic generation of radiology reports as an auxiliary solution for expert diagnosis has garnered considerable attention from researchers. However, due to the complexity of medical image interpretation, current models exhibit issues such as aleatoric uncertainty and epistemic uncertainty, leading to a lack of stability in the content description of the generated medical reports. To address these issues, we propose a Team Role Interaction Network (TRINet) for the automatic generation of radiology reports, which is composed of multiple Team-member role models and a Team-leader role model.
View Article and Find Full Text PDFMogrosides, which have various pharmacological activities, are mainly extracted from (Luo Han Guo) and are widely used as natural zero-calorie sweeteners. Unfortunately, the difficult cultivation and long maturation time of Luo Han Guo have contributed to a shortage of mogrosides. To overcome this obstacle, we developed a highly efficient biosynthetic method using engineered to synthesize sweet mogrosides from bitter mogrosides.
View Article and Find Full Text PDFIt is known that sialyllactose (SL) in mammalians is a major source of sialic acid (Sia), which can further form cytidine monophosphate sialic acid (CMP-Sia), and the final product is polysialic acid (polySia) using polysialyltransferases (polySTs) on the neural cell adhesion molecule (NCAM). This process is called NCAM polysialylation. The overexpression of polysialylation is strongly related to cancer cell migration, invasion, and metastasis.
View Article and Find Full Text PDFThe expression of polysialic acid (polySia) on the neuronal cell adhesion molecule (NCAM) is called NCAM-polysialylation, which is strongly related to the migration and invasion of tumor cells and aggressive clinical status. Thus, it is important to select a proper drug to block tumor cell migration during clinical treatment. In this study, we proposed that lactoferrin (LFcinB11) may be a better candidate for inhibiting NCAM polysialylation when compared with CMP and low-molecular-weight heparin (LMWH), which were determined based on our NMR studies.
View Article and Find Full Text PDFThe stems and leaves of Panax notoginseng contain high saponins, but they are often discarded as agricultural waste. In this study, the predominant ginsenosides Rg1, Rc, and Rb2, presented in the stems and leaves of ginseng plants, were biotransformed into value-added rare ginsenosides F1, compound Mc1 (C-Mc1), and Rd2, respectively. A fungal strain YMS6 (Penicillium sp.
View Article and Find Full Text PDFIEEE/ACM Trans Comput Biol Bioinform
June 2023
Objective: Depression is accompanied by abnormalities in large-scale functional brain networks. This paper combined static and dynamic methods to analyze the abnormal topology and changes of functional connectivity network (FCN) of depression.
Methods: We collected resting-state EEG recordings from 27 depressed subjects and 28 normal subjects, then obtained 68 regions of interests (ROIs) by source localization.
Background: Resveratrol is a commercially available stilbenoid widely used as dietary supplements, functional food ingredients, and cosmetic ingredients due to its diverse physiological activities. The production of resveratrol in microorganisms provides an ideal source that reduces the cost of resveratrol, but the titer in Saccharomyces cerevisiae was still much lower than that in other hosts.
Results: To achieve enhanced production of resveratrol in S.
Background: Ginsenosides are Panax plant-derived triterpenoid with wide applications in cardiovascular protection and immunity-boosting. However, the saponins content of Panax plants is fairly low, making it time-consuming and unsustainable by direct extraction. Protopanaxadiol (PPD) is a common precursor of dammarane-type saponins, and its sufficient supply is necessary for the efficient synthesis of ginsenoside.
View Article and Find Full Text PDF. Inferring the optimized and sparse network structure from the fully connected matrix is a key step in functional connectivity (FC) analysis. However, it is still an urgent problem to be solved, how to exclude the weak and spurious connections contained in functional networks objectively.
View Article and Find Full Text PDFJ Agric Food Chem
August 2022
Sclareol glycol is a key starting material with significant market interest for synthesizing high-value ambroxide, a sustainable substitute for ambergris in high-end fragrances. Sclareol glycol can be obtained by biotransformation of sclareol, a labdane-type diterpene, using . However, the pathway and mechanism of sclareol glycol biosynthesis remain unclear.
View Article and Find Full Text PDFAccording to the WHO, the number of mental disorder patients, especially depression patients, has overgrown and become a leading contributor to the global burden of disease. With the rising of tools such as artificial intelligence, using physiological data to explore new possible physiological indicators of mental disorder and creating new applications for mental disorder diagnosis has become a new research hot topic. We present a multi-modal open dataset for mental-disorder analysis.
View Article and Find Full Text PDFFront Bioeng Biotechnol
January 2022
2,3,5,6-Tetramethylpyrazine (TMP) is an active pharmaceutical ingredient originally isolated from for curing cardiovascular and cerebrovascular diseases and is widely used as a popular flavoring additive in the food industry. Hence, there is a great interest in developing new strategies to produce this high-value compound in an ecological and economical way. Herein, a cost-competitive combinational approach was proposed to accomplish green and high-efficiency production of TMP.
View Article and Find Full Text PDFUDP-glycosyltransferase (UGT)-mediated glycosylation is a common modification in triterpene saponins, which exhibit a wide range of bioactivities and important pharmacological effects. However, few UGTs involved in saponin biosynthesis have been identified, limiting the biosynthesis of saponins. In this study, an efficient heterologous expression system was established for evaluating the UGT-mediated glycosylation process of triterpene saponins.
View Article and Find Full Text PDFPurpose: Long non-coding RNA (lncRNA) DNAJC3 antisense RNA 1 (head to head) (DNAJC3-AS1) plays a key role in the progression of several cancers. However, its biological role in hepatocellular carcinoma (HCC) is still unclear. We aimed to investigate the role of DNAJC3-AS1 in the development of HCC and reveal the potential mechanisms.
View Article and Find Full Text PDFRationale/importance: Researches have highlighted communication deficits between resting-state brain networks in major depressive disorder (MDD), as reflected in abnormal functional connectivity (FC). However, it is unclear whether impaired FC is associated with MDD pathology or is simply incidental to MDD symptoms. Moreover, there is no generalized theory to analyze the impact of treatment modalities on MDD.
View Article and Find Full Text PDFMicrosc Res Tech
February 2022
In this article, we explored systematically the spore morphology of Pteridaceae by observation of the species distributed in Shandong Province using scanning electron microscopy (SEM). The results showed that the spore morphology of all the species in the family is tetrahedral and trilete. The characters of spore ornamentation are intraspecies stable, but significantly different among species and genera.
View Article and Find Full Text PDFIEEE Trans Neural Syst Rehabil Eng
August 2021
At present, most brain functional studies are based on traditional frequency bands to explore the abnormal functional connections and topological organization of patients with depression. However, they ignore the characteristic relationship of electroencephalogram (EEG) signals in the time domain. Therefore, this paper proposes a network decomposition model based on Improved Empirical Mode Decomposition (EMD), it is suitable for time-frequency analysis of brain functional network.
View Article and Find Full Text PDFMyocardial ischemia/reperfusion (MI/R) may impair cardiac functions. Dexmedetomidine (DEX) is protective in various clinical cases. Therefore, this study investigated the role and mechanism of DEX in MI/R.
View Article and Find Full Text PDFIEEE Trans Nanobioscience
July 2020
At present, depression has become a main health burden in the world. However, there are many problems with the diagnosis of depression, such as low patient cooperation, subjective bias and low accuracy. Therefore, reliable and objective evaluation method is needed to achieve effective depression detection.
View Article and Find Full Text PDFAcetoin is an important four-carbon compound that has many applications in foods, chemical synthesis, cosmetics, cigarettes, soaps, and detergents. Its stereoisomer (S)-acetoin, a high-value chiral compound, can also be used to synthesize optically active drugs, which could enhance targeting properties and reduce side effects. Recently, considerable progress has been made in the development of biotechnological routes for (S)-acetoin production.
View Article and Find Full Text PDFThe expression of ADAMTS-1 mRNA in myocardium of viral heart disease (VHD) mice was investigated to explore its role in myocardial fibrosis. A total of 150 purebred inbred Balb/c mice were used in this study. According to the principle of similar body weight, 50 mice were selected to make an acute viral myocarditis (VMC) animal model (acute VMC group), and 50 mice were selected to make a chronic VMC animal model (chronic VMC group), and the remaining 50 mice were selected as a control group.
View Article and Find Full Text PDFBackground: The relationship between protein structure and its bioactivity is one of the fundamental problems for protein engineering and pharmaceutical design.
Method: A new method, called SPTD (Simulated Protein Thermal Detection), was proposed for studying and improving the thermal stability of enzymes. The method was based on the evidence observed by conducting the MD (Molecular Dynamics) simulation for all the atoms of an enzyme vibrating from the velocity at a room temperature (e.
Comput Methods Programs Biomed
October 2018
Background And Objective: Strands of evidence have supported existence of negative attentional bias in patients with depression. This study aimed to assess the behavioral and electrophysiological signatures of attentional bias in major depressive disorder (MDD) and explore whether ERP components contain valuable information for discriminating between MDD patients and healthy controls (HCs).
Methods: Electroencephalography data were collected from 17 patients with MDD and 17 HCs in a dot-probe task, with emotional-neutral pairs as experimental materials.