Mitogenomic recognition of incognito lineages in the mud spiny lobster Panulirus polyphagus (Herbst, 1793): A tale of unique genetic structuring and diversification.

This study provides the first documentation of three deep conspecific lineages within Panulirus polyphagus in the Indian Ocean, bridging the gap in genetic research. Comparative mitogenomics between lineages (L) at both species and family levels, evolutionary relationships and heterogeneity of sequence divergence within Decapoda, and divergence time estimation were performed. The characterized mitogenomes ranged from 15,685-15,705 bp in size and exhibited a typical pancrustacean pattern.

Physiological and molecular insights into the allelopathic effects on agroecosystems under changing environmental conditions.

Allelopathy is a natural phenomenon of competing and interfering with other plants or microbial growth by synthesizing and releasing the bioactive compounds of plant or microbial origin known as allelochemicals. This is a sub-discipline of chemical ecology concerned with the effects of bioactive compounds produced by plants or microorganisms on the growth, development and distribution of other plants and microorganisms in natural communities or agricultural systems. Allelochemicals have a direct or indirect harmful effect on one plant by others, especially on the development, survivability, growth, and reproduction of species through the production of chemical inhibitors released into the environment.

Full-length transcriptome from different life stages of cobia (Rachycentron canadum, Rachycentridae).

Cobia (Rachycentron canadum, Rachycentridae) is one of the prospective species for mariculture. The transcriptome-based study on cobia was hampered by an inadequate reference genome and a lack of full-length cDNAs. We used a long-read based sequencing technology (PacBio Sequel II Iso-Seq3 SMRT) to obtain complete transcriptome sequences from larvae, juveniles, and various tissues of adult cobia, and a single SMRTcell generated 99 gigabytes of data and 51,205,946,694 bases.

Insights into the divergent evolution of the oceanic squid Sthenoteuthis oualaniensis (Cephalopoda: Ommastrephidae) from the Indian Ocean.

Sthenoteuthis oualaniensis is known for its complex population structure with three major transoceanic forms (viz. middle-sized, dwarf, and giant forms) whose taxonomic status has been disputed for decades. This integrated taxonomic study examines these prevenient morphotypes gathered on cruises in the Indian Ocean to ascertain their status in the evolutionary history of the species.

Comparative response of rice cultivars to elevated air temperature in Bhabar region of Indian Himalaya: status on yield attributes.

Increasing atmospheric temperature is the consequence of global warming, which is expected to influence crop growth and development, resulting in declining productivity in the tropical agriculture system. The selection of temperature tolerant crop cultivars with higher productivity to meet the future demand of the world expanding human population requires a thorough understanding of crop growth feedback to increasing temperature. Therefore, a field experiment was conducted during season of 2012 and 2013 to understand the response of yield and yield-related traits of eleven rice cultivars to elevated temperature grown inside field mounted temperature gradient tunnel (TGT) in the Bhabar region of the Indian Himalayas.

Trachysalambria aspera (Alcock, 1905) (Crustacea, Decapoda, Penaeidae) from the southeastern Arabian Sea, India.

Trachysalambria aspera (Alcock, 1905) was first reported and described in detail by Alcock (1905) as Trachypeaneus asper Alcock, 1905, from the Ganjam coast (Odisha, India) and Andaman Sea. Chan et al. (2016) revised the species under the genus Trachysalambria based on molecular genetic data and resolved the confusion in their taxonomy in literature.

Mitogenomic architecture of the multivalent endemic black clam (Villorita cyprinoides) and its phylogenetic implications.

The Indian black clam Villorita cyprinoides (Family: Cyrenidae), an extractive commercially exploited species with aquaculture importance contributing more than 70% of clam fishery in India, is endemic to the Indian peninsula. Currently, there is very sparse information, especially on the molecular data of Villorita. The present study aims to provide a comprehensive knowledge of mitogenome architecture and assess the phylogenetic status of Cyrenidae.

Elevated temperature modulates rice pollen structure: a study from foothill of Himalayan agro-ecosystem in India.

Rice cultivation is practiced in various agro-climatic zones ranging from tropical to temperate. Anthesis is a critical stage for deciding productivity which is controlled by numerous biotic and abiotic stresses. Elevated temperature is one of the key abiotic stresses that adversely modulate the pollen formation and structure, i.

Mitochondrial signatures revealed panmixia in Lutjanus argentimaculatus (Forsskål 1775).

Mangrove red snapper, Lutjanus argentimaculatus is a commercially important fish. The genetic stock structure of L. argentimaculatus from Indian waters was identified using mitochondrial ATPase 6 and ATPase 8, and cytochrome b (Cytb) genes.

Molecular phylogeny of commercially important lobster species from Indian coast inferred from mitochondrial and nuclear DNA sequences.

Lobsters constitute low-volume high-value crustacean fishery resource along Indian coast. For the conservation and management of this declining resource, accurate identification of species and larvae is essential. The objectives of this work were to generate species-specific molecular signatures of 11 commercially important species of lobsters of families Palinuridae and Scyllaridae and to reconstruct a phylogeny to clarify the evolutionary relationships among genera and species included in this study.