An important goal of comparative and functional genomics is to connect genetic polymorphisms to phenotypic variation. Leopards (Panthera pardus) from northern South Africa are particularly diverse, as here a unique colour morph occurs, as well as two deeply diverged southern (SA) and central African (CA) mitochondrial clades, stemming from Pleistocene refugia. Here, we present the first whole genomes of a red leopard and a black (captive) leopard, and wildtypes belonging to the CA and SA mitochondrial clades, to evaluate genome-wide diversity, divergence, and high impact mutations that may relate to their phenotype.
View Article and Find Full Text PDFWhile rangeland ecosystems are globally important for livestock production, they also support diverse wildlife assemblages and are crucial for biodiversity conservation. As rangelands around the world have become increasingly degraded and fragmented, rethinking farming practice in these landscapes is vital for achieving conservation goals, rangeland recovery, and food security. An example is reinstating livestock shepherding, which aims to recouple grazing regimes to vegetation conditioned to semi-arid climates and improve productivity by reducing overgrazing and rewiring past ecological functions.
View Article and Find Full Text PDFCarnivore predation on livestock often leads people to retaliate. Persecution by humans has contributed strongly to global endangerment of carnivores. Preventing livestock losses would help to achieve three goals common to many human societies: preserve nature, protect animal welfare, and safeguard human livelihoods.
View Article and Find Full Text PDFLow microsatellites used to investigate leopard genetic structure severely restricts the results by Ropiquet et al. (2015) to infer population structure for managers.
View Article and Find Full Text PDFWhile African leopard populations are considered to be continuous as demonstrated by their high genetic variation, the southernmost leopard population exists in the Eastern and Western Cape, South Africa, where anthropogenic activities may be affecting this population's structure. Little is known about the elusive, last free-roaming top predator in the region and this study is the first to report on leopard population structuring using nuclear DNA. By analyzing 14 microsatellite markers from 40 leopard tissue samples, we aimed to understand the populations' structure, genetic distance, and gene flow (Nm).
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