Publications by authors named "Jason P Chin"

Article Synopsis
  • Phosphonates, which contain a direct carbon-phosphorus bond, are important sources of phosphorus in certain environments, with 2-aminoethylphosphonate (AEP) being the most common.
  • Many bacteria can break down AEP using a specific pathway involving the enzyme PhnW; however, this process has limitations due to PhnW's inability to handle other related compounds like -methyl AEP (MAEP).
  • The study introduces a new group of FAD-dependent oxidoreductases that can efficiently convert MAEP to phosphonoacetaldehyde (PAA), thus enhancing the degradation pathways of AEP and allowing some bacteria to generate PAA without relying on PhnW.
View Article and Find Full Text PDF
Article Synopsis
  • * Microorganisms, particularly bacteria, have developed systems to utilize phosphonates as a resource in phosphate-limited environments, with these systems varying in specificity.
  • * Research has focused on understanding the evolution, regulation, and mechanisms of microbial enzymes that degrade phosphonates, with at least three distinct enzymatic pathways identified for breaking down the C-P bond. *
View Article and Find Full Text PDF

Energy metabolism in extant life is centered around phosphate and the energy-dense phosphoanhydride bonds of adenosine triphosphate (ATP), a deeply conserved and ancient bioenergetic system. Yet, ATP synthesis relies on numerous complex enzymes and has an autocatalytic requirement for ATP itself. This implies the existence of evolutionarily simpler bioenergetic pathways and potentially primordial alternatives to ATP.

View Article and Find Full Text PDF

Inorganic polyphosphate (polyP) is ubiquitous across all forms of life, but the study of its metabolism has been mainly confined to bacteria and yeasts. Few reports detail the presence and accumulation of polyP in Archaea, and little information is available on its functions and regulation. Here, we report that homologs of bacterial polyP metabolism proteins are present across the major taxa in the Archaea, suggesting that archaeal populations may have a greater contribution to global phosphorus cycling than has previously been recognised.

View Article and Find Full Text PDF

Many areas of the ocean are nutrient-poor yet support large microbial populations, leading to intense competition for and recycling of nutrients. Organic phosphonates are frequently found in marine waters, but require specialist enzymes for catabolism. Previous studies have shown that the genes that encode these enzymes in marine systems are under Pho regulon control and so are repressed by inorganic phosphate.

View Article and Find Full Text PDF

We report, for the first time, extensive biologically mediated phosphate removal from wastewater during high-rate anaerobic digestion (AD). A hybrid sludge bed/fixed-film (packed pumice stone) reactor was employed for low-temperature (12°C) anaerobic treatment of synthetic sewage wastewater. Successful phosphate removal from the wastewater (up to 78% of influent phosphate) was observed, mediated by biofilms in the reactor.

View Article and Find Full Text PDF

Phosphorus cycling in the biosphere has traditionally been thought to involve almost exclusively transformations of the element in its pentavalent oxidation state. Recent evidence, however, suggests that a significant fraction of environmental phosphorus may exist in a more reduced form. Most abundant of these reduced phosphorus compounds are the phosphonates, with their direct carbon-phosphorus bonds, and striking progress has recently been made in elucidating the biochemistry of microbial phosphonate transformations.

View Article and Find Full Text PDF

Organophosphonates are ancient molecules that contain the chemically stable C-P bond, which is considered a relic of the reducing atmosphere on primitive earth. Synthetic phosphonates now have a wide range of applications in the agricultural, chemical and pharmaceutical industries. However, the existence of C-P compounds as contemporary biogenic molecules was not discovered until 1959, with the identification of 2-aminoethylphosphonic acid in rumen protozoa.

View Article and Find Full Text PDF

Microbial cells, and ultimately the Earth's biosphere, function within a narrow range of physicochemical conditions. For the majority of ecosystems, productivity is cold-limited, and it is microbes that represent the failure point. This study was carried out to determine if naturally occurring solutes can extend the temperature windows for activity of microorganisms.

View Article and Find Full Text PDF