Molecular motors fulfill critical functions within all living beings. Understanding their underlying working principles is therefore of great interest. Here we develop a simple model inspired by the two-component biomolecular motor F_{o}-F_{1} ATP synthase.
View Article and Find Full Text PDFInformation engines can convert thermal fluctuations of a bath at temperature T into work at rates of order k_{B}T per relaxation time of the system. We show experimentally that such engines, when in contact with a bath that is out of equilibrium, can extract much more work. We place a heavy, micron-scale bead in a harmonic potential that ratchets up to capture favorable fluctuations.
View Article and Find Full Text PDFWe have experimentally realized an information engine consisting of an optically trapped, heavy bead in water. The device raises the trap center after a favorable "up" thermal fluctuation, thereby increasing the bead's average gravitational potential energy. In the presence of measurement noise, poor feedback decisions degrade its performance; below a critical signal-to-noise ratio, the engine shows a phase transition and cannot store any gravitational energy.
View Article and Find Full Text PDFUnderstanding the connections between information and thermodynamics has been among the most visible applications of stochastic thermodynamics. While recent theoretical advances have established that the second law of thermodynamics sets limits on information-to-energy conversion, it is currently unclear to what extent real systems can achieve the predicted theoretical limits. Using a simple model of an information engine that has recently been experimentally implemented, we explore the limits of information-to-energy conversion when an information engine's benefit is limited to output energy that can be stored.
View Article and Find Full Text PDFInformation-driven engines that rectify thermal fluctuations are a modern realization of the Maxwell-demon thought experiment. We introduce a simple design based on a heavy colloidal particle, held by an optical trap and immersed in water. Using a carefully designed feedback loop, our experimental realization of an "information ratchet" takes advantage of favorable "up" fluctuations to lift a weight against gravity, storing potential energy without doing external work.
View Article and Find Full Text PDFThe excess work required to drive a stochastic system out of thermodynamic equilibrium through a time-dependent external perturbation is directly related to the amount of entropy produced during the driving process, allowing excess work and entropy production to be used interchangeably to quantify dissipation. Given the common intuition of biological molecular machines as internally communicating work between components, it is tempting to extend this correspondence to the driving of one component of an autonomous system by another; however, no such relation between the internal excess work and entropy production exists. Here we introduce the "transduced additional free-energy rate" between strongly coupled subsystems of an autonomous system, which is analogous to the excess power in systems driven by an external control parameter that receives no feedback from the system.
View Article and Find Full Text PDFWe study the finite-time erasure of a one-bit memory consisting of a one-dimensional double-well potential, with each well encoding a memory macrostate. We focus on setups that provide full control over the form of the potential-energy landscape and derive protocols that minimize the average work needed to erase the bit over a fixed amount of time. We allow for cases where only some of the information encoded in the bit is erased.
View Article and Find Full Text PDFWe study the thermodynamic cost associated with the erasure of one bit of information over a finite amount of time. We present a general framework for minimizing the average work required when full control of a system's microstates is possible. In addition to exact numerical results, we find simple bounds proportional to the variance of the microscopic distribution associated with the state of the bit.
View Article and Find Full Text PDFWe consider the dynamics of a microswimmer and show that they can be approximated by active Brownian motion. The swimmer is modeled by coupled overdamped Langevin equations with periodic driving. We compare the energy dissipation of the real swimmer to that of the active Brownian motion model, finding that the latter can massively underestimate the complete dissipation.
View Article and Find Full Text PDFSystems with interacting degrees of freedom play a prominent role in stochastic thermodynamics. Our aim is to use the concept of detached path probabilities and detached entropy production for bipartite Markov processes and elaborate on a series of special cases including measurement-feedback systems, sensors, and hidden Markov models. For these special cases we show that fluctuation theorems involving the detached entropy production recover known results which have been obtained separately before.
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