Publications by authors named "Janet Harwood"

Rare recurrent copy number variants (CNVs) at chromosomal loci 22q11.2 and 16p11.2 are genetic disorders with lifespan risk for neuropsychiatric disorders.

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Rare recurrent copy number variants (CNVs) at chromosomal loci 22q11.2 and 16p11.2 are among the most common rare genetic disorders associated with significant risk for neuropsychiatric disorders across the lifespan.

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Introduction: Cerebral visual impairment (CVI) is the most common cause of visual impairment in children in the UK. Diagnosis is based on identification of visual behaviours (ViBes) relating to visual dysfunction. Examination techniques and inventories have been developed to elicit these in children with a developmental age of two years or more.

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  • * Researchers discovered 287 genomic regions associated with schizophrenia, emphasizing genes specifically active in excitatory and inhibitory neurons, and identified 120 key genes potentially responsible for these associations.
  • * The findings highlight important biological processes related to neuronal function, suggesting overlaps between common and rare genetic variants in both schizophrenia and neurodevelopmental disorders, ultimately aiding future research on these conditions.
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Characterization of the genetic landscape of Alzheimer's disease (AD) and related dementias (ADD) provides a unique opportunity for a better understanding of the associated pathophysiological processes. We performed a two-stage genome-wide association study totaling 111,326 clinically diagnosed/'proxy' AD cases and 677,663 controls. We found 75 risk loci, of which 42 were new at the time of analysis.

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  • - Psychotic symptoms, like delusions and hallucinations, impact about 50% of Alzheimer's disease (AD) patients, leading to worse outcomes, increased cognitive impairment, and more depressive symptoms compared to those without these symptoms.
  • - A large genome-wide meta-analysis of over 12,000 AD patients revealed significant genetic variations linked to psychosis in AD, identifying two critical genetic loci and emphasizing the role of the APOE gene in risk factors.
  • - The study found genetic correlations between AD with psychosis and factors like cognitive attainment and bipolar disorder, suggesting complex genetic interactions that affect susceptibility to both AD and associated psychotic symptoms.
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Background: Recent breakthroughs in psychiatric genetics have implicated biological pathways onto which genetic risk for psychiatric disorders converges. However, these studies do not reveal the developmental time point(s) at which these pathways are relevant.

Methods: We aimed to determine the relationship between psychiatric risk and developmental gene expression relating to discrete biological pathways.

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Defining the mechanisms involved in the aetiology of Alzheimer's disease from genome-wide association studies alone is challenging since Alzheimer's disease is polygenic and most genetic variants are non-coding. Non-coding Alzheimer's disease risk variants can influence gene expression by affecting miRNA binding and those located within enhancers and within CTCF sites may influence gene expression through alterations in chromatin states. In addition, their function can be cell-type specific.

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Late-onset Alzheimer's disease (LOAD), the most common cause of dementia, and a huge global health challenge, is a neurodegenerative disease of uncertain aetiology. To deliver effective diagnostics and therapeutics, understanding the molecular basis of the disease is essential. Contemporary large genome-wide association studies (GWAS) have identified over seventy novel genetic susceptibility loci for LOAD.

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  • FMRP binds to specific mRNA targets, which are linked to genetic risks for psychiatric disorders, making it difficult to determine whether these associations stem from FMRP or other genetic traits.
  • The study analyzed various genetic data (common and rare variants) to explore the link between FMRP targets and psychiatric conditions like schizophrenia, major depressive disorder, and bipolar disorder.
  • Results showed that FMRP high-confidence targets are enriched for genetic risk alleles in these disorders, suggesting that FMRP plays a significant role in gene regulation related to a range of psychiatric conditions.
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  • The study focuses on identifying new genes related to late-onset Alzheimer's disease by using a large and advanced SNP panel, imputation software, and a new analysis method within a massive dataset from the International Genomics of Alzheimer's Project Consortium.
  • Researchers found three significant new genes: PPARGC1A, RORA, and ZNF423, all of which are associated with key biological processes linked to Alzheimer's disease.
  • PPARGC1A and RORA are connected to circadian rhythms and energy metabolism, while ZNF423 is thought to play a role in DNA damage repair within an Alzheimer's-specific protein network.
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Nucleosome positioning is important for neurodevelopment, and genes mediating chromatin remodelling are strongly associated with human neurodevelopmental disorders. To investigate changes in nucleosome positioning during neural differentiation, we generate genome-wide nucleosome maps from an undifferentiated human-induced pluripotent stem cell (hiPSC) line and after its differentiation to the neural progenitor cell (NPC) stage. We find that nearly 3% of nucleosomes are highly positioned in NPC, but significantly, there are eightfold fewer positioned nucleosomes in pluripotent cells, indicating increased positioning during cell differentiation.

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Common genetic variation contributes a substantial proportion of risk for both schizophrenia and bipolar disorder. Furthermore, there is evidence of significant, but not complete, overlap in genetic risk between the two disorders. It has been hypothesised that genetic variants conferring risk for these disorders do so by influencing brain development, leading to the later emergence of symptoms.

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We have applied chromatin sequencing technology to the euryarchaeon Thermococcus kodakarensis, which is known to possess histone-like proteins. We detect positioned chromatin particles of variable sizes associated with lengths of DNA differing as multiples of 30 bp (ranging from 30 bp to >450 bp) consistent with formation from dynamic polymers of the archaeal histone dimer. T.

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