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Modern experiments routinely produce extensive data of the diffusive dynamics of tracer particles in a large range of systems. Often, the measured diffusion turns out to deviate from the laws of Brownian motion, i.e.
View Article and Find Full Text PDFSingle-particle tracking (SPT) has become a popular tool to study the intracellular transport of molecules in living cells. Inferring the character of their dynamics is important, because it determines the organization and functions of the cells. For this reason, one of the first steps in the analysis of SPT data is the identification of the diffusion type of the observed particles.
View Article and Find Full Text PDFIn this paper, we have proposed a statistical procedure for detecting transitions of the mean-square-displacement exponent value within a single trajectory. With this procedure, we have identified three regimes of proteins dynamics on a cell membrane, namely, subdiffusion, free diffusion, and immobility. The fourth considered dynamics type, namely, superdiffusion was not detected.
View Article and Find Full Text PDFTaking advantage of recent single-particle tracking data, we compare the popular standard mean-squared displacement method with a statistical testing hypothesis procedure for three testing statistics and for two particle types: membrane receptors and the G proteins coupled to them. Each method results in different classifications. For this reason, more rigorous statistical tests are analyzed here in detail.
View Article and Find Full Text PDFIn this paper, we study ergodic properties of α-stable autoregressive fractionally integrated moving average (ARFIMA) processes which form a large class of anomalous diffusions. A crucial practical question is how long trajectories one needs to observe in an experiment in order to claim that the analyzed data are ergodic or not. This will be solved by checking the asymptotic convergence to 0 of the empirical estimator F(n) for the dynamical functional D(n) defined as a Fourier transform of the n-lag increments of the ARFIMA process.
View Article and Find Full Text PDFIn this paper we study asymptotic behavior of a dynamical functional for an α-stable autoregressive fractionally integrated moving average (ARFIMA) process. We find an analytical formula for this important statistics and show its usefulness as a diagnostic tool for ergodic properties. The obtained results point to the very fast convergence of the dynamical functional and show that even for short trajectories one may obtain reliable conclusions on the ergodic properties of the ARFIMA process.
View Article and Find Full Text PDFThe analysis of trajectories recorded in experiments often requires calculating time averages instead of ensemble averages. According to the Boltzmann hypothesis, they are equivalent only under the assumption of ergodicity. In this paper, we implement tools that allow to study ergodic properties.
View Article and Find Full Text PDFWe present a systematic statistical analysis of the recently measured individual trajectories of fluorescently labeled telomeres in the nucleus of living human cells. The experiments were performed in the U2OS cancer cell line. We propose an algorithm for identification of the telomere motion.
View Article and Find Full Text PDFIn this paper we clarify the relationship between the relaxation rate and relaxation time distributions underlying the Kohlrausch-Williams-Watts (KWW) photoconductivity build-ups in indium- and gallium-doped Cd(1-x)Mn(x)Te mixed crystals. We discuss the role of asymptotic properties of the corresponding probability density functions. We show that the relaxation rate distribution, as a completely asymmetric α-stable distribution, leads to an infinite mean value of the effective relaxation rate.
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