Publications by authors named "James Alexander Booth"

Article Synopsis
  • The survival of bacteria exposed to antibiotics is influenced by factors such as antibiotic type, concentration, treatment duration, and the physiological and environmental state of the cells, as well as the presence of persisters, a resilient sub-population of bacteria.
  • An improved persister assay was developed to better assess these resilient cells under varying growth conditions and a range of antibiotic treatments.
  • Results showed that persister survival is highly dependent on the growth-supporting properties of the medium and factors like the type of antibiotic used and the cells' physiological state, emphasizing the need for consistent experimental conditions in future research.
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In vitro determination of hemolytic properties is a common and important method for preliminary evaluation of cytotoxicity of chemicals, drugs, or any blood-contacting medical device or material. The method itself is relatively straightforward, however, protocols used in the literature vary substantially. This leads to significant difficulties both in interpreting and in comparing the obtained values.

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Microbe exposure to pharmaceutical and non-pharmaceutical agents plays a role in the development of antibiotic resistance. The risks and consequences associated with extensive disinfectant use during the COVID-19 pandemic remain unclear. Some disinfectants, like sanitizers, contain genotoxic chemicals that damage microbial DNA, like phenol and hydrogen peroxide.

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Extracellular pH has been assumed to play little if any role in how bacteria respond to antibiotics and antibiotic resistance development. Here, we show that the intracellular pH of Escherichia coli equilibrates to the environmental pH following treatment with the DNA damaging antibiotic nalidixic acid. We demonstrate that this allows the environmental pH to influence the transcription of various DNA damage response genes and physiological processes such as filamentation.

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Single-stranded oligonucleotides (ssODNs) and zinc-finger nucleases (ZFNs) are two approaches that are being pursued to achieve sequence specific genome modification. ZFNs induce high rates of homologous recombination (HR) between the target sequence and a given donor by introducing site-specific genomic double-strand breaks (DSBs). The mode of action that is used by ssODNs remains largely unknown, but may involve genomic integration of the ssODNs.

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