Publications by authors named "Jain Y"

We present a novel approach to cell phenotyping for spatial proteomics that addresses the challenge of generalization across diverse datasets with varying marker panels. Our approach utilizes a transformer with channel-wise attention to create a language-informed vision model; this model's semantic understanding of the underlying marker panel enables it to learn from and adapt to heterogeneous datasets. Leveraging a curated, diverse dataset with cell type labels spanning the literature and the NIH Human BioMolecular Atlas Program (HuBMAP) consortium, our model demonstrates robust performance across various cell types, tissues, and imaging modalities.

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Purpose: The clinico-radiological dilemma in post-treatment high-grade gliomas, between disease recurrence (TR) and treatment-related changes (TRC), still persists. FET (Fluoro-ethyl-tyrosine) PET has been extensively used as problem-solving modality for cases where MR imaging is inconclusive. We incorporated a systematic imaging and clinical follow-up algorithm in a multi-disciplinary clinic (MDC) setting to analyse our cohort of FET PET in post-treatment gliomas.

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Automated blood vessel segmentation is critical for biomedical image analysis, as vessel morphology changes are associated with numerous pathologies. Still, precise segmentation is difficult due to the complexity of vascular structures, anatomical variations across patients, the scarcity of annotated public datasets, and the quality of images. Our goal is to provide a foundation on the topic and identify a robust baseline model for application to vascular segmentation using a new imaging modality, Hierarchical Phase-Contrast Tomography (HiP-CT).

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Introduction: Cancer is one of the major public health concerns leading to high trends of mortality and morbidity in India. Health-related quality of life (HRQoL) is an indicator of the sense of well-being applicable, which includes all the domains of physical, social, emotional, and functional well-being. The inferences can strengthen the palliative care needs of patients.

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Intramuscular hydatid cysts are an uncommon presentation of echinococcosis, with most cases occurring in the liver and lungs. This case report describes an 81-year-old male who presented with a painless, progressively enlarging swelling in the right thigh noticed over the past year. The patient's history included trauma to the area from an animal-related incident five years earlier.

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  • - Dermoid cysts are rare in the head and neck area and represent a small percentage of oral cyst cases, stemming from developmental defects during embryonic fusion.
  • - A case study focuses on a 16-year-old girl with a smooth swelling in the floor of her mouth, which had been present for two months and extended to her left submandibular region.
  • - After confirming the diagnosis with ultrasonography, the girl underwent surgery, and the histological findings confirmed it was a sublingual dermoid cyst.
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Efficient algorithms are needed to segment vasculature in new three-dimensional (3D) medical imaging datasets at scale for a wide range of research and clinical applications. Manual segmentation of vessels in images is time-consuming and expensive. Computational approaches are more scalable but have limitations in accuracy.

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Introduction:  The sphenoid sinus (SS), a paired paranasal sinus located within the sphenoid bone, is crucial in various physiological and pathological processes. Its anatomical variations are of significant interest in clinical practice, particularly in otolaryngology, neurosurgery, and radiology. This study aims to determine the anatomical variations of the SS and related structures using computed tomography (CT).

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  • - Mucocles of the appendix, which include mucinous cystadenomas and cystadenocarcinomas, are rare but important lesions that involve mucin buildup in the appendix, requiring careful diagnosis and management.
  • - Diagnosing these lesions can be challenging since they share symptoms with acute appendicitis and other conditions, making it essential to use imaging, histology, and clinical data to get an accurate diagnosis.
  • - Treatment options vary based on the lesion's nature, from simple appendectomy for benign cases to more extensive surgeries like right hemicolectomy for malignant ones, with factors like tumor type and size impacting outcomes and treatment decisions.
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Tobacco, being an established risk factor for significant mortality and morbidity, causes over 7 million annual deaths globally. India is a country with over 270 million active tobacco users. On the one hand, although the willingness to quit amongst tobacco users is as high as 55.

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  • The Indian bidi industry is primarily unregulated, leading to illegal production and easier access for minors.
  • Research has estimated annual bidi stick production to range from 319.83 billion to over 1 trillion sticks using factors like auctioned tendu leaves and the number of bidi rollers.
  • The findings highlight the need for stricter regulations to improve data accuracy and protect public health from the risks associated with bidi consumption.
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  • * The prognosis for melanoma is often assessed using the Breslow index, which measures the thickness of the tumor.
  • * In this case report, a 61-year-old woman had an invasive melanoma on her face, and after surgical removal and further analysis with MRI and histology, the report discusses treatment protocols and insights into how melanoma can present differently in patients.
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  • * A total of 23 studies were included, revealing an overall anxiety prevalence of 18.7% among older adults, though results showed significant variability between studies.
  • * The findings highlight the growing concern of mental health issues in the elderly population, urging policymakers and health systems to address anxiety as a public health priority due to an increasing elderly demographic and changing health patterns.
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  • - Automated blood vessel segmentation is vital for analyzing biomedical images due to its link to various diseases, but it's challenging because of complex vascular structures, individual anatomical differences, limited annotated data, and image quality issues
  • - This study aims to set a foundation for vascular segmentation using a new imaging technique called Hierarchical Phase-Contrast Tomography (HiP-CT), supported by a high-quality training dataset from three kidneys imaged as part of the Human Organ Atlas Project
  • - Using the nnU-Net framework, the research shows promising segmentation performance with high Dice scores, but highlights the need for additional metrics beyond voxel concordance as some errors remain, particularly with large vessels collapsing during segmentation
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Genomic information is increasingly used to inform medical treatments and manage future disease risks. However, any personal and societal gains must be carefully balanced against the risk to individuals contributing their genomic data. Expanding our understanding of actionable genomic insights requires researchers to access large global datasets to capture the complexity of genomic contribution to diseases.

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Introduction: Indian cigarillos (bidi) are low-cost alternatives to cigarettes with only 22% imposed taxes, and turnover of up to INR 4 million per annum exempted from taxation.

Aims And Methods: This paper estimates revenue implications and potential loss of life years (YLLs) averted if the bidi industry is subjected to increased regulations and taxation. Revenue estimates at 10% increased regulation and 100% regulation were calculated, followed by estimates at taxes equivalent to cigarettes and World Health Organization-Framework Convention on Tobacco Control (WHO-FCTC) recommendation.

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The Human BioMolecular Atlas Program (HuBMAP) aims to construct a reference 3D structural, cellular, and molecular atlas of the healthy adult human body. The HuBMAP Data Portal (https://portal.hubmapconsortium.

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Abdominal volvulus represents a critical condition characterized by the abnormal twisting of the GI tract, potentially leading to obstruction and vascular compromise. Prompt recognition and appropriate management are essential to prevent complications and improve patient outcomes. This comprehensive review examines the anatomy, pathophysiology, clinical presentation, and diagnostic evaluation of, and management strategies for abdominal volvulus.

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  • Inguinal hernias require effective surgical treatment, and this review compares two main techniques: bilateral open inguinal hernia repair and Rives-Stoppa repair.
  • Rives-Stoppa may have benefits like lower recurrence rates and fewer complications, while the bilateral open technique is simpler and more familiar to many surgeons.
  • The review highlights the need for tailored approaches based on patient factors and surgeon expertise, and calls for more research to improve long-term outcomes and surgical innovations.
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Background Cardiovascular diseases, including heart failure (HF), are leading causes of death and disability in India. However, most studies in India only include urban populations or rural regions with improved access and may not represent the poorest patients or regions. We studied the epidemiology of HF patients admitted to a secondary care hospital in rural Chhattisgarh, India.

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Aim: To evaluate relationship between metabolic PET metabolic parameters and size of the primary tumor, various histopathological subtypes of renal cell carcinoma (RCC) and Fuhrman grade of the tumors.

Material And Methods: Retrospective analysis of 93 biopsy-proven RCC patients who underwent pretreatment flourine 18 flourodeoxyglucose PET/computed tomography ( 18 F FDG PET/CT) was performed. Quantitative PET parameters, size of the primary tumor, histopathological subtypes and Fuhrman grades of the tumor were extracted.

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Unlabelled: A 19-year-old female presented with hemoptysis. Computed tomography (CT) pulmonary angiography revealed aberrant vessels from descending thoracic aorta, draining into pulmonary veins (left-to-left shunt). She was managed by transcatheter embolization of the aberrant vessels using N-butyl cyanoacrylate (NBCA) with balloon occlusion.

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Robotic innovations in breast surgery have ushered in a new era of precision, safety, and patient-centred care. This comprehensive review explores the multifaceted realm of robotic breast surgery, from preoperative planning to postoperative outcomes, learning curves for surgeons, and the implications for healthcare policies. We examine the ethical considerations, cost-effectiveness, and future directions, including integrating artificial intelligence and telesurgery.

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