Publications by authors named "Jahir A Ahmed"

We propose a simple model for chromatin organization based on the interaction of the chromatin fibers with lamin proteins along the nuclear membrane. Lamin proteins are known to be a major factor that influences chromatin organization and hence gene expression in the cells. We provide a quantitative understanding of lamin-associated chromatin organization in a crowded macromolecular environment by systematically varying the heteropolymer segment distribution and the strength of the lamin-chromatin attractive interaction.

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In the rotational sandpile model, either the clockwise or the anticlockwise toppling rule is assigned to all the lattice sites. It has all the features of a stochastic sandpile model but belongs to a different universality class than the Manna class. A crossover from rotational to Manna universality class is studied by constructing a random rotational sandpile model and assigning randomly clockwise and anticlockwise rotational toppling rules to the lattice sites.

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Invasion of a sticky random solid by an aqueous solution is modeled through a chemical reaction. In this reaction, the solid elements dissolve in the solution and redeposit back on the rough interface. A self-established potential gradient (SEPG) in the binding energy of the solid is developed spontaneously and the system gets phase separated into "hard" and "soft" solids.

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