Publications by authors named "J Armenia"

Developing new classes of drugs that are active against infections caused by is a priority for treating and managing this deadly disease. Here, we describe screening a small library of 20 DNA gyrase inhibitors and identifying new lead compounds. Three structurally diverse analogues were identified with minimal inhibitory concentrations of 0.

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Article Synopsis
  • Over 50 hereditary degenerative disorders are linked to the expansion of short tandem DNA repeats (STRs), especially (GAA) repeats, which are associated with diseases like Friedreich's ataxia.
  • Researchers used a CRISPR-Cas9 nickase system to study the impact of introducing targeted DNA nicks near (GAA) repeats, discovering that nicks 5' of the repeat significantly boosted expansion rates and sizes in dividing cells.
  • The study suggests that nicks can convert to double-strand breaks during DNA replication, resulting in repeat expansions, and also showed that 5' nicks can enhance expansion frequency in nondividing yeast cells, though less than in dividing cells.
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Prostate cancer is among the most common diseases worldwide. Despite recent progress with treatments, patients with advanced prostate cancer have poor outcomes and there is a high unmet need in this population. Understanding molecular determinants underlying prostate cancer and the aggressive phenotype of disease can help with design of better clinical trials and improve treatments for these patients.

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Unlabelled: PARP inhibitors (PARPi) are currently indicated for the treatment of ovarian, breast, pancreatic, and prostate cancers harboring mutations in the tumor suppressor genes or . In the case of ovarian and prostate cancers, their classification as homologous recombination repair (HRR) deficient (HRD) or mutated also makes PARPi an available treatment option beyond or mutational status. However, identification of the most relevant genetic alterations driving the HRD phenotype has proven difficult and recent data have shown that other genetic alterations not affecting HRR are also capable of driving PARPi responses.

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Large reference datasets of protein-coding variation in human populations have allowed us to determine which genes and genic subregions are intolerant to germline genetic variation. There is also a growing number of genes implicated in severe Mendelian diseases that overlap with genes implicated in cancer. We hypothesized that cancer-driving mutations might be enriched in genic subregions that are depleted of germline variation relative to somatic variation.

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