Neuroinformatics Applications of Data Science and Artificial Intelligence.

Leveraging vast neuroimaging and electrophysiological datasets, AI algorithms are uncovering patterns that offer unprecedented insights into brain structure and function. Neuroinformatics, the fusion of neuroscience and AI, is advancing technologies like brain-computer interfaces, AI-driven cognitive enhancement, and personalized neuromodulation for treating neurological disorders. These developments hold potential to improve cognitive functions, restore motor abilities, and create human-machine collaborative systems.

A Bayesian Multiplex Graph Classifier of Functional Brain Connectivity Across Diverse Tasks of Cognitive Control.

This article seeks to investigate the impact of aging on functional connectivity across different cognitive control scenarios, particularly emphasizing the identification of brain regions significantly associated with early aging. By conceptualizing functional connectivity within each cognitive control scenario as a graph, with brain regions as nodes, the statistical challenge revolves around devising a regression framework to predict a binary scalar outcome (aging or normal) using multiple graph predictors. Popular regression methods utilizing multiplex graph predictors often face limitations in effectively harnessing information within and across graph layers, leading to potentially less accurate inference and predictive accuracy, especially for smaller sample sizes.

Intricacies of Human-AI Interaction in Dynamic Decision-Making for Precision Oncology: A Case Study in Response-Adaptive Radiotherapy.

Background: Adaptive treatment strategies that can dynamically react to individual cancer progression can provide effective personalized care. Longitudinal multi-omics information, paired with an artificially intelligent clinical decision support system (AI-CDSS) can assist clinicians in determining optimal therapeutic options and treatment adaptations. However, AI-CDSS is not perfectly accurate, as such, clinicians' over/under reliance on AI may lead to unintended consequences, ultimately failing to develop optimal strategies.

Interactive Visualization and Computation of 2D and 3D Probability Distributions.

Purpose: Mathematical modeling, probability estimation, and statistical inference represent core elements of modern artificial intelligence (AI) approaches for data-driven prediction, forecasting, classification, risk-estimation, and prognosis. Currently there are many tools that help calculate and visualize univariate probability distributions, however, very few resources venture beyond into multivariate distributions, which are commonly used in advanced statistical inference and AI decision-making. This article presents a new web-calculator that enables some calculation and visualization of bivariate and trivariate probability distributions.

Classifying migraine using PET compressive big data analytics of brain's -opioid and D2/D3 dopamine neurotransmission.

Migraine is a common and debilitating pain disorder associated with dysfunction of the central nervous system. Advanced magnetic resonance imaging (MRI) studies have reported relevant pathophysiologic states in migraine. However, its molecular mechanistic processes are still poorly understood .

Generalizable prediction of childhood ADHD symptoms from neurocognitive testing and youth characteristics.

Childhood attention-deficit/hyperactivity disorder (ADHD) symptoms are believed to result from disrupted neurocognitive development. However, evidence for the clinical and predictive value of neurocognitive assessments in this context has been mixed, and there have been no large-scale efforts to quantify their potential for use in generalizable models that predict individuals' ADHD symptoms in new data. Using data drawn from the Adolescent Brain Cognitive Development Study (ABCD), a consortium that recruited a diverse sample of over 10,000 youth (ages 9-10 at baseline) across 21 U.

Multimodal Stereotactic Brain Tumor Segmentation Using 3D-Znet.

Stereotactic brain tumor segmentation based on 3D neuroimaging data is a challenging task due to the complexity of the brain architecture, extreme heterogeneity of tumor malformations, and the extreme variability of intensity signal and noise distributions. Early tumor diagnosis can help medical professionals to select optimal medical treatment plans that can potentially save lives. Artificial intelligence (AI) has previously been used for automated tumor diagnostics and segmentation models.

Machine Learning-Based Prediction of Mental Well-Being Using Health Behavior Data from University Students.

Background: Since the onset of the COVID-19 pandemic in early 2020, the importance of timely and effective assessment of mental well-being has increased dramatically. Machine learning (ML) algorithms and artificial intelligence (AI) techniques can be harnessed for early detection, prognostication and prediction of negative psychological well-being states.

Methods: We used data from a large, multi-site cross-sectional survey consisting of 17 universities in Southeast Asia.

SOCRAT: a Dynamic Web Toolbox for Interactive Data Processing, Analysis and Visualization.

Many systems for exploratory and visual data analytics require platform-dependent software installation, coding skills, and analytical expertise. The rapid advances in data-acquisition, web-based information, and communication and computation technologies promoted the explosive growth of online services and tools implementing novel solutions for interactive data exploration and visualization. However, web-based solutions for visual analytics remain scattered and relatively problem-specific.

A clinical decision support system for AI-assisted decision-making in response-adaptive radiotherapy (ARCliDS).

Involvement of many variables, uncertainty in treatment response, and inter-patient heterogeneity challenge objective decision-making in dynamic treatment regime (DTR) in oncology. Advanced machine learning analytics in conjunction with information-rich dense multi-omics data have the ability to overcome such challenges. We have developed a comprehensive artificial intelligence (AI)-based optimal decision-making framework for assisting oncologists in DTR.

Machine learning-based colorectal cancer prediction using global dietary data.

Background: Colorectal cancer (CRC) is the third most commonly diagnosed cancer worldwide. Active health screening for CRC yielded detection of an increasingly younger adults. However, current machine learning algorithms that are trained using older adults and smaller datasets, may not perform well in practice for large populations.

Sex difference in the associations of socioeconomic status, cognitive function and brain volume with dementia in old adults: Findings from the OASIS study.

Background: Sex differences in the association of cognitive function and imaging measures with dementia have not been fully investigated while sex-based investigation of dementia has been discussed. Understanding sex differences in the dementia-related socioeconomic, cognitive, and imaging measurements is important for uncovering sex-related pathways to dementia and facilitating early diagnosis, family planning, and cost control.

Methods: We selected data from the Open Access Series of Imaging Studies with longitudinal measurements of brain volumes on 150 individuals aged 60 to 96 years.

Brain structure and allelic associations in Alzheimer's disease.

Background: Alzheimer's disease (AD), the most prevalent form of dementia, affects 6.5 million Americans and over 50 million people globally. Clinical, genetic, and phenotypic studies of dementia provide some insights of the observed progressive neurodegenerative processes, however, the mechanisms underlying AD onset remain enigmatic.

DataSifterText: Partially Synthetic Text Generation for Sensitive Clinical Notes.

Petabytes of health data are collected annually across the globe in electronic health records (EHR), including significant information stored as unstructured free text. However, the lack of effective mechanisms to securely share clinical text has inhibited its full utilization. We propose a new method, DataSifterText, to generate partially synthetic clinical free-text that can be safely shared between stakeholders (e.

DataSifter II: Partially synthetic data sharing of sensitive information containing time-varying correlated observations.

There is a significant public demand for rapid data-driven scientific investigations using aggregated sensitive information. However, many technical challenges and regulatory policies hinder efficient data sharing. In this study, we describe a partially synthetic data generation technique for creating anonymized data archives whose joint distributions closely resemble those of the original (sensitive) data.

Transfusion-associated hyperkalemia in pediatric population: Analyses for risk factors and recommendations.

Background: Transfusion-associated hyperkalemia (TAH) is a potentially life-threatening complication of red blood cell (RBC) transfusion. Previously, we reported features of RBC transfusions from 35 pediatric patients (TAH group) who had hyperkalemia with RBC transfusion in one-year period at four facilities. In this study, we used multivariate analyses and artificial intelligence to compare the TAH group to newly collected control group (non-TAH group) to identify factors associated with TAH occurrence.

The clusters of health-risk behaviours and mental wellbeing and their sociodemographic correlates: a study of 15,366 ASEAN university students.

Background: This study investigated, through cluster analysis, the associations between behavioural characteristics, mental wellbeing, demographic characteristics, and health among university students in the Association of Southeast Asian Nations (ASEAN) University Network - Health Promotion Network (AUN-HPN) member universities.

Methods: Data were retrieved from a cross-sectional self-administered online survey among undergraduate students in seven ASEAN countries. A two-step cluster analysis was employed, with cluster labels based on the predominant characteristics identified within the clusters.

Determinism, well-posedness, and applications of the ultrahyperbolic wave equation in spacekime.

Spatiotemporal dynamics of many natural processes, such as elasticity, heat propagation, sound waves, and fluid flows are often modeled using partial differential equations (PDEs). Certain types of PDEs have closed-form analytical solutions, some permit only numerical solutions, some require appropriate initial and boundary conditions, and others may not have stable, global, or even well-posed solutions. In this paper, we focus on one-specific type of second-order PDE - the ultrahyperbolic wave equation in multiple time dimensions.

Kimesurface Representation and Tensor Linear Modeling of Longitudinal Data.

Many modern techniques for analyzing time-varying longitudinal data rely on parametric models to interrogate the time-courses of univariate or multivariate processes. Typical analytic objectives include utilizing retrospective observations to model current trends, predict prospective trajectories, derive categorical traits, or characterize various relations. Among the many mathematical, statistical, and computational strategies for analyzing longitudinal data, tensor-based linear modeling offers a unique algebraic approach that encodes different characterizations of the observed measurements in terms of state indices.

Znet: Deep Learning Approach for 2D MRI Brain Tumor Segmentation.

Background: Detection and segmentation of brain tumors using MR images are challenging and valuable tasks in the medical field. Early diagnosing and localizing of brain tumors can save lives and provide timely options for physicians to select efficient treatment plans. Deep learning approaches have attracted researchers in medical imaging due to their capacity, performance, and potential to assist in accurate diagnosis, prognosis, and medical treatment technologies.

Precision radiotherapy via information integration of expert human knowledge and AI recommendation to optimize clinical decision making.

In the precision medicine era, there is a growing need for precision radiotherapy where the planned radiation dose needs to be optimally determined by considering a myriad of patient-specific information in order to ensure treatment efficacy. Existing artificial-intelligence (AI) methods can recommend radiation dose prescriptions within the scope of this available information. However, treating physicians may not fully entrust the AI's recommended prescriptions due to known limitations or at instances when the AI recommendation may go beyond physicians' current knowledge.

Prediction Modeling of Mental Well-Being Using Health Behavior Data of College Students.

Since the onset of the COVID-19 pandemic in early 2020, the importance of timely and effective assessment of mental well-being has increased dramatically. Due to heightened risks for developing mental illness, this trend is likely to continue during the post-pandemic period. Machine learning (ML) algorithms and artificial intelligence (AI) techniques can be harnessed for early detection, prognostication and prediction of negative psychological well-being states.

Optimal dynamic treatment regime estimation using information extraction from unstructured clinical text.

The wide-scale adoption of electronic health records (EHRs) provides extensive information to support precision medicine and personalized health care. In addition to structured EHRs, we leverage free-text clinical information extraction (IE) techniques to estimate optimal dynamic treatment regimes (DTRs), a sequence of decision rules that dictate how to individualize treatments to patients based on treatment and covariate history. The proposed IE of patient characteristics closely resembles "The clinical Text Analysis and Knowledge Extraction System" and employs named entity recognition, boundary detection, and negation annotation.

A data value metric for quantifying information content and utility.

Data-driven innovation is propelled by recent scientific advances, rapid technological progress, substantial reductions of manufacturing costs, and significant demands for effective decision support systems. This has led to efforts to collect massive amounts of heterogeneous and multisource data, however, not all data is of equal quality or equally informative. Previous methods to capture and quantify the utility of data include value of information (VoI), quality of information (QoI), and mutual information (MI).

Modeling and prediction of pressure injury in hospitalized patients using artificial intelligence.

Background: Hospital-acquired pressure injuries (PIs) induce significant patient suffering, inflate healthcare costs, and increase clinical co-morbidities. PIs are mostly due to bed-immobility, sensory impairment, bed positioning, and length of hospital stay. In this study, we use electronic health records and administrative data to examine the contributing factors to PI development using artificial intelligence (AI).