DFT study of the hydrolysis reaction in atranes and ocanes: the influence of transannular bonding.

Thermochemical kinetics of hydrolysis reactions of compounds with transannular intramolecular M…N bonds, i.e., atranes RM(OCH2CH2)3N and ocanes R2M(OCH2CH2)2NH (M = Si, Ge; R = F, Cl, Me), is studied at the B3LYP/aug-cc-pVDZ theoretical level.

An assessment of DFT methods for predicting the thermochemistry of ion-molecule reactions of group 14 elements (Si, Ge, Sn).

Experimental mass-spectrometry data on thermochemistry of methide transfer reactions (CH₃)₃M(+) + M'(CH₃)₄ ↔ M(CH₃)₄ + (CH₃)₃M'(+) (M, M' = Si, Ge or Sn) and the formation energy of the [(CH₃)₃Si-CH₃-Si(CH₃)₃](+) complex are used as benchmarks for DFT methods (B3LYP, BMK, M06L, and ωB97XD). G2 and G3 theory methods are also used for the prediction of thermochemical data. BMK, M06L, and ωB97XD methods give the best fit to experimental data (close to chemical accuracy) as well as to G2 and G3 results, while B3LYP demonstrates poor performance.

Quantum chemical study of silanediols as metal binding groups for metalloprotease inhibitors.

DFT (B3LYP and M06L) as well as ab initio (MP2) methods with Dunning cc-pVnZ (n=2,3) basis sets are employed for the study of the binding ability of the new class of protease inhibitors, i.e., silanediols, in comparison to the well-known and well-studied class of inhibitors with hydroxamic functionality (HAM).

Vibrational spectra of silatranes and germatranes XM(OCH₂CH₂)₃N (X=F,Cl,H; M=Si,Ge). The problem of the theoretical prediction of condensed phase spectra.

The structures of silatranes and germatranes XM(OCH(2)CH(2))(3)N (X=F,Cl,H; M=Si,Ge) were optimized and their vibrational spectra were calculated at the B3LYP/aug-cc-pVDZ level of theory. Theoretical frequencies of vibrations perpendicular to the C(3) axis (E type) are in good agreement with experimental values, while the axial vibrations (MX and M..

Theoretical study of the mechanisms of the hydrolysis and condensation reactions of silicon and titanium alkoxides: similarities and differences.

Stationary states for hydrolysis reactions in M(OCH(3))(4) + nH(2)O (M = Si, Ti; n = 1-3) systems are optimized at the B3LYP and MP2 levels with the Wachters basis set for titanium and the cc-pVDZ set for other atoms. Geometries of these states for M = Ti are characterized by trigonal bipyramidal (water molecules in front-side position) and octahedral coordination (for back-side position). Barrier heights for hydrolysis and condensation are substantially lower than those for silicon in keeping with experimental results.

Rearrangements of [C(6)H(7)Si](+) cations. A radiochemical and quantum chemical study.

Nucleogenic cations were formed by beta-decay of phenylsilane tritiated at ortho- and para-positions of the benzene ring as well as at the silyl group and the products of their reactions with methyl tert-butyl ether were analyzed by radiochromatography. We found that the o-silatolyl cation was isomerized into the silabenzyl cation while the p-silatolyl cation was not. Furthermore, the silabenzyl cation was not converted into other isomers.

Role of structures with penta- and hexacoordinate silicon in the nucleophile-catalyzed hydrolysis of tetramethoxysilane.

The mechanism of the base catalyzed hydrolysis of tetramethoxysilane (TMOS), proposed earlier on the basis of experimental data, is assessed by theoretical methods, i.e. MP2 and B3LYP with 6-31G(d) and Dunning correlation-consistent basis sets.

Mechanism of the catalytic activity of nucleophiles in the stepwise hydrolysis and condensation reactions of tetramethoxysilane.

Active ingredients: A model for the simplest hydrolysis reaction is applied to all stages of stepwise hydrolysis and condensation taking place during a sol-gel process. The picture shows the molecular structures of the transition states of the ammonia- (left) and OH(-)-promoted (right) condensation reactions of two Si(OH)(4) molecules, including an additional water molecule.The previously proposed model of the catalytic activity of nucleophiles in the hydrolysis reaction of tetramethoxysilane is expanded to the subsequent stages of hydrolysis, that is, the stepwise hydrolysis of (MeO)(4-x)(OH)(x)Si (x=1-3) molecules, and to the condensation reaction of completely hydrolysed species.

Structure and vibrational spectra of Ti(IV) hydroxides and their clusters with expanded titanium coordination. DFT study.

Equilibrium structures of H(4-n)Ti(OH)n (n = 2-4) molecules and the Ti(OH)4 dimer and trimers were optimized at the B3LYP level of theory. Theoretical vibrational frequencies of TiO stretching modes obtained with several basis sets were compared with the existing experimental frequencies of these vibrations, and the 6-31+G(d) set was chosen for cluster calculations. Only one energy minimum was found for the [Ti(OH)4](2) dimer, but two isomers without symmetry elements stabilized by internal hydrogen bonds and two isomers, belonging to C(s) and C(i) point groups, with free OH groups were found as minima at the [Ti(OH)4](3) potential energy surface.

Dihydrogen and methane elimination from adducts formed by the interaction of carbenium and silylium cations with nucleophiles.

Stationary points for reactions R'R' 'HX(+) + YH --> [R'R' 'X-Y](+) + H(2) (I) and R'(CH(3))HX(+) + YH -->[R'HX-Y](+) + CH(4) (II) (R', R' ' = CH(3), H; X = C, Si; Y = CH(3)O, (CH(3))(2)N, and C(6)H(5)) are located and optimized by the B3LYP/aug-cc-pVDZ method. A similar mechanism was found to be operative for both types of reactions with X = C and X = Si. Formation of the intermediate (adduct) results in the transfer of electron density from the electron-rich bases to the X atoms and in the growth of a positive charge on a hydrogen atom attached to Y.

Vibrational spectra of trimethylsilanol. The problem of the assignment of the SiOH group frequencies.

The assignment of the SiOH group vibrations of trimethylsilanol, which is still controversial, is proposed. This assignment is based on theoretical B3LYP force field scaled using the constants of the (CH3)3Si group optimized to fit experimental vibrational frequencies of (CH3)3SiF and (CD3)3SiF molecules as well as the OH stretching scale factor from methanol. The ab initio force field defined in this way gives a good agreement of the theoretical vibrational frequencies of trimethylsilanol with the positions of IR and Raman bands observed in the gas phase.