The effect of the microbiota on its human host is driven, at least in part, by small-molecule and protein effectors it produces. Here, we report on the use of functional multigenomic screening to identify microbiota-encoded effectors. In this study, genomic DNA from 116 human-associated bacteria was cloned , and the resulting multigenomic library was screened using a nuclear factor-κB reporter (NF-κB) assay.
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