Exploring the therapeutic potential of endolysin CD27L_EAD against Clostridioides difficile infection.

Objectives: Clostridioides difficile has emerged as a major cause of life-threatening diarrheal disease. Conventional antibiotics used in current standards of care exacerbate the emergence of antibiotic-resistant strains and pose a risk of recurrent C. difficile infection (CDI).

Unveiling the mechanism of bactericidal activity of a cecropin A-fused endolysin LNT113.

Endolysins are lytic enzymes produced by bacteriophages at the end of their lytic cycle and degrade the peptidoglycan layer of the bacterial cell wall. Thus, they have been extensively explored as a promising antibacterial agent to replace or supplement current antibiotics. Gram-negative bacteria, however, are prone to resist exogenous endolysins owing to their protective outer membrane.

Blanket antimicrobial resistance gene database with structural information, BOARDS, provides insights on historical landscape of resistance prevalence and effects of mutations in enzyme structure.

Antimicrobial resistance (AMR) in pathogenic bacteria poses a significant threat to public health, yet there is still a need for development in the tools to deeply understand AMR genes based on genetic or structural information. In this study, we present an interactive web database named Blanket Overarching Antimicrobial-Resistance gene Database with Structural information (BOARDS, sbml.unist.

Rapid Dot-Blot Immunoassay for Detecting Multiple Serotypes.

, a major contributor to foodborne infections, typically causes self-limiting gastroenteritis. However, it is frequently invasive and disseminates across the intestinal epithelium, leading to deadly bacteremia. Although the genus is subdivided into >2,600 serotypes based on their antigenic determinants, only few serotypes are responsible for most human infections.

Single-Cell Hemoprotein Diet Changes Adipose Tissue Distributions and Re-Shapes Gut Microbiota in High-Fat Diet-Induced Obese Mice.

We have previously observed that feeding with single-cell hemoprotein (heme-SCP) in dogs (1 g/day for 6 days) and broiler chickens (1 ppm for 32 days) increased the proportion of lactic acid bacteria in the gut while reducing their body weights by approximately 1~2%. To define the roles of heme-SCP in modulating body weight and gut microbiota, obese C57BL/6N mice were administered varied heme-SCP concentrations (0, 0.05, and 0.

Corrigendum: Motility increase of Adherent Invasive (AIEC) induced by a sub-inhibitory concentration of recombinant endolysin LysPA90.

[This corrects the article DOI: 10.3389/fmicb.2022.

Quantification of Movement Error from Spiral Drawing Test.

Parkinson's disease is a neurodegenerative disease that often comes with symptoms such as muscle stiffness, slowness of movement, and tremors at rest. Since this disease negatively influences the quality of life in patients, an early and accurate diagnosis is important for slowing the progression of the disease and providing effective treatment to patients. One of the quick and easy methods for diagnosing is the spiral drawing test and the differences between the target spiral picture and the drawing by patients can be used as an indicator of movement error.

Single-cell hemoprotein (heme-SCP) exerts the prebiotic potential to establish a healthy gut microbiota in small pet dogs.

Unlabelled: To investigate the effect of the single-cell hemoprotein (heme-SCP) source on animals, a dog-treat (100 g for each dog) harboring 0.2% heme-SCP was manufactured and fed to seven pet dogs (< 10 kg) in a randomized manner (irrespective of owner's feeding style, dogs' health conditions, and staple diets), and the feces before and after the dog-treat diet were analyzed to define the structure of the microbiota. The total bacterial species of the seven dogs showed no difference (564-584), although the bacterial compositions varied significantly.

Cyclic di-GMP Modulates a Metabolic Flux for Carbon Utilization in Salmonella enterica Serovar Typhimurium.

Salmonella enterica serovar Typhimurium is an enteric pathogen spreading via the fecal-oral route. Transmission across humans, animals, and environmental reservoirs has forced this pathogen to rapidly respond to changing environments and adapt to new environmental conditions. Cyclic di-GMP (c-di-GMP) is a second messenger that controls the transition between planktonic and sessile lifestyles, in response to environmental cues.

Motility increase of adherent invasive (AIEC) induced by a sub-inhibitory concentration of recombinant endolysin LysPA90.

Endolysins are bacteriophage enzymes required for the eruption of phages from inside host bacteria the degradation of the peptidoglycan cell wall. Recombinant endolysins are increasingly being seen as potential antibacterial candidates, with a number currently undergoing clinical trials. Bacteriophage PBPA90 infecting harbors a gene encoding an endolysin, PA90.

Transcriptional insight into the effect of benzalkonium chloride on resistance and virulence potential in Salmonella Typhimurium.

Benzalkonium chloride (BC), a class of quaternary ammonium compounds (QACs), is widely used as a surface disinfectant in food industries and hospitals. To date, little is known about the underlying mechanisms of how bacterial pathogens respond to and develop resistance against QACs. We investigated the genome-wide transcriptional responses of Salmonella enterica serovar Typhimurium to treatment with BC and identified the genetic determinants required for bacterial resistance to BC, including ramRA, phoU-pstBACS, cpxARP, and ugpQCEAB.

Rotation-Time Symmetry Breaking in Frustrated Chiral Nematic Driven by a Pulse-Train Waveform.

We report waveform-induced rotation-time symmetry breaking in liquid crystal director motion. Homeotropic cells filled with a negative dielectric anisotropy chiral nematic exhibit persistent and visually observable waves of director orientation with a time period of at least 30 driving field cycles. Their existence in the space of driving waveform parameters is explored.

Evaluation of Typhimurium Lacking , , or as a Prophylactic Vaccine against Lethal Infection.

Non-typhoidal (NTS) is one of the primary causes of foodborne gastroenteritis; occasionally, it causes invasive infection in humans. Because of its broad host range, covering diverse livestock species, foods of animal origin pose a critical threat of NTS contamination. However, there is currently no licensed vaccine against NTS infection.

Cooperative Interaction between Acid and Copper Resistance in .

The persistence of pathogenic under acidic conditions poses a serious risk to food safety, especially in acidic foods such as kimchi. To identify the bacterial factors required for acid resistance, transcriptomic analysis was conducted on an acid-resistant enterotoxigenic strain and the genes with significant changes in their expression under acidic pH were selected as putative resistance factors against acid stress. These genes included those associated with a glutamatedependent acid resistance (GDAR) system and copper resistance.

Salmonella Typhimurium lacking phoBR as a live vaccine candidate against poultry infection.

Salmonella enterica serovar Typhimurium, with a broad-host range, is a predominant cause of non-typhoidal Salmonella infection in humans, and the infectious source is highly associated with food animals, especially poultry. Considering the horizontal transmission of S. Typhimurium from farm animals to humans, vaccination has been strongly recommended in industrial animals.

Retroreflection-based sandwich type affinity sensing of isothermal gene amplification products for foodborne pathogen detection.

Loop-mediated isothermal amplification (LAMP) is an outstanding method for molecular diagnostics, as the rapid, specific, and sensitive amplification of target genes is possible. However, it is necessary to measure fluorescence in the quantitative analysis of LAMP products, so a sophisticated optical setup is required. This study tried to develop a novel sensing method that can quantify target analytes with simple equipment, such as nonspectroscopic white light and a CMOS camera.

σ-Mediated Stress Response Induced by Outer Membrane Perturbation Dampens Virulence in serovar Typhimurium.

alters cellular processes as a strategy to improve its intracellular fitness during host infection. Alternative factors are known to rewire cellular transcriptional regulation in response to environmental stressors. σ factor encoded by the gene is a key regulator required for eliciting the general stress response in many proteobacteria.

Rapid Real-Time Polymerase Chain Reaction for Serotyping Based on Novel Unique Gene Markers by Pangenome Analysis.

An accurate diagnostic method for serovars is fundamental to preventing the spread of associated diseases. A diagnostic polymerase chain reaction (PCR)-based method has proven to be an effective tool for detecting pathogenic bacteria. However, the gene markers currently used in real-time PCR to detect serovars have low specificity and are developed for only a few serovars.

Rapid Detection of Enteritidis, Typhimurium, and Thompson by Specific Peak Analysis Using Matrix-Assisted Laser Desorption Ionization Time-of-Flight Mass Spectrometry.

Rapid detection of serovars is important for the effective control and monitoring of food industries. In this study, we evaluate the application of matrix-assisted laser desorption/ionization time-of-flight mass spectrometry for the rapid detection of three serovars, Enteritidis, Typhimurium, and Thompson, that are epidemiologically important in Korea. All strains were identified at the genus level, with a mean score of 2.

Development of a Genoserotyping Method for Infantis Detection on the Basis of Pangenome Analysis.

In recent years, Infantis has become a predominant serovariant in clinical and poultry isolates, thereby imposing a substantial economic burden on both public health and the livestock industry. With the aim of coping with the steep increase in serovar Infantis prevalence, a polymerase chain reaction (PCR)-based rapid and accurate diagnostic assay was developed in this study through pangenome profiling of 60 serovars. A gene marker, SIN_02055, was identified, which is present in the .

Transcriptomic Approach for Understanding the Adaptation of to Contaminated Produce.

Salmonellosis is a form of gastroenteritis caused by infection. The main transmission route of salmonellosis has been identified as poorly cooked meat and poultry products contaminated with . However, in recent years, the number of outbreaks attributed to contaminated raw produce has increased dramatically.

Typhimurium Lacking YjeK as a Candidate Live Attenuated Vaccine Against Invasive Infection.

Non-typhoidal (NTS) causes gastrointestinal infection, which is commonly self-limiting in healthy humans but may lead to invasive infection at extraintestinal sites, leading to bacteremia and focal systemic infections in the immunocompromised. However, a prophylactic vaccine against invasive NTS has not yet been developed. In this work, we explored the potential of a Δ mutant strain as a live attenuated vaccine against invasive NTS infection.

Rapid determination of carbapenem resistance by low-cost colorimetric methods: Propidium Iodide and alamar blue staining.

Carbapenems are a class of β-lactam antibiotics with a broad antimicrobial activity spectrum. Owing to their sturdy structures resistant to most β-lactamases, they have been regarded as one of the last-resort antibiotics for combating multidrugresistant bacterial infections. However, the emergence of carbapenem resistance increases predominantly in nosocomial pathogens.

Generation and manipulation of isotropic droplets in nematic medium using switchable dielectrophoresis.

Dielectrophoresis (DEP) in a medium with anisotropic dielectric susceptibility is very different from typical DEP in an isotropic medium: The direction of particle actuation can be switched depending on the direction of the susceptibility tensor of the medium. However, the understanding of switchable DEP (SDEP) in an anisotropic medium is still in its infant stage. Here, we investigate SDEP using heat-generated isotropic droplets in a nematic liquid crystal (LC) medium.

Laser-Induced Nanodroplet Injection and Reconfigurable Double Emulsions with Designed Inner Structures.

Microfabrication of complex double emulsion droplets with controlled substructures, which resemble biological cells, is an important but a highly challenging subject. Here, a new approach is proposed based on laser-induced injection of water nanodroplets into a liquid crystal (LC) drop. In contrast to the conventional top-down microfluidic fabrication, this method employs a series of bottom-up strategies such as nanodroplet injection, spontaneous and assisted coalescence, elastically driven actuation, and self-assembly.