Publications by authors named "Hugh Boothe"

Objectives: We evaluated Nanopore sequencing for influenza surveillance.

Methods: Influenza A and B PCR-positive samples from hospital patients in Oxfordshire, UK, and a UK-wide population survey from winter 2022-23 underwent Nanopore sequencing following targeted rt-PCR amplification.

Results: From 941 infections, successful sequencing was achieved in 292/388 (75 %) available Oxfordshire samples: 231 (79 %) A/H3N2, 53 (18 %) A/H1N1, and 8 (3 %) B/Victoria and in 53/113 (47 %) UK-wide samples.

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Article Synopsis
  • Syndromic surveillance traditionally depends on healthcare-seeking patients, but this study suggests that involving community cohorts can yield valuable insights, especially given the presence of multiple respiratory viruses during the 2022/23 winter season in the UK.
  • The research analyzed data from nearly 33,000 tests, revealing SARS-CoV-2, RSV, and influenza A/B positivity rates, with peaks of these viruses occurring at different times and varying by age group, highlighting that younger individuals were most affected by RSV and older individuals by SARS-CoV-2.
  • Findings indicated that many individuals who tested positive reported few symptoms, complicating the ability to distinguish between the viruses solely based on symptoms, and
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Background: Clostridium difficile colitis is associated with increased age, antibiotic usage, and hospitalization. Severe C. difficile colitis refractory to medical therapy may require surgical intervention including subtotal colectomy.

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