Publications by authors named "Hongbin Song"

Background: Immunotherapy that targets immune checkpoints has achieved revolutionary success, but its application in solid tumors remains limited, highlighting the need for reliable enhancement of the efficacy of immunotherapy. Golgi protein 73 (GP73), a Golgi membrane protein, has been implicated in various cellular processes, including immune regulation. Recent studies suggested that GP73 may play a role in modulating the immune response in patients with cancer.

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Motivation: The human microbiome, comprises complex associations and communication networks among microbial communities, which are crucial for maintaining health. The construction of microbial networks is vital for elucidating these associations. However, existing microbial networks inference methods cannot solve the issues of zero-inflation and non-linear associations.

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  • Vitiligo is an autoimmune disease with limited treatment options, and this study explores a new approach using baricitinib, a JAK inhibitor, combined with narrow-band ultraviolet B (NB-UVB) therapy.
  • In a controlled trial with 33 adults suffering from progressive non-segmental vitiligo, those receiving combination therapy showed a significantly higher improvement rate (70.6%) compared to those receiving NB-UVB alone (12.5%) after 16 weeks.
  • The side effects were mostly minor, suggesting that the combination treatment of baricitinib and NB-UVB is both effective and well-tolerated for vitiligo patients.
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  • Rotavirus group C (RVC) is a significant cause of gastroenteritis outbreaks worldwide, but there is limited genome data available for it.
  • In a study in China, researchers analyzed an outbreak by sequencing samples from 22 patients, finding six positive for RVC, specifically identifying the strain SJZ217.
  • Genomic analysis showed that SJZ217 shares high similarity with a strain from Korea and clusters with RVC strains from Japan and Europe, highlighting its genetic diversity and reassortment patterns.
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  • - Diarrhea is a significant public health problem globally, with limited research on coinfections caused by multiple enteric viruses, prompting this study on a child with acute gastroenteritis infected by human adenovirus (HAdV) and human astrovirus (HAstV).
  • - Researchers used RT-PCR and whole-genome sequencing to analyze the genotypes and genetic evolution of the viruses, identifying HAdV as genotype 41 and HAstV as a recombinant strain of HAstV-2 and HAstV-4.
  • - The study found that both viruses in this coinfection are rare variants in Southern China, contributing to the understanding of genetic diversity among epidemic strains and providing insights for future vaccine and medical research.
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Background: Human neutrophil elastase (HNE) is an important contributor to lung diseases such as acute lung injury (ALI) or acute respiratory distress syndrome. Therefore, this study aimed to identify natural HNE inhibitors with anti-inflammatory activity through machine learning algorithms, in vitro assays, molecular dynamic simulation, and an in vivo ALI assay.

Methods: Based on the optimized Discovery Studio two-dimensional molecular descriptors, combined with different molecular fingerprints, six machine learning models were established using the Naïve Bayesian (NB) method to identify HNE inhibitors.

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  • Mycosis fungoides (MF) is a common skin lymphoma often misdiagnosed due to its non-specific early symptoms, leading to treatment delays; researchers aimed to find urinary biomarkers for early detection of MF through proteomic analysis.
  • A study involving 13 early-stage MF patients treated with interferon α-2a and phototherapy analyzed urine samples before and after treatment, comparing them with healthy controls to identify differentially expressed proteins.
  • The results revealed 41 proteins with significant expression changes, with certain proteins like Serpin B5, epidermal growth factor (EGF), and RhoA showing lower levels in untreated MF patients, but these levels normalized after treatment, indicating potential biomarkers for monitoring MF.
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  • Salmonella enterica serovar Typhimurium (S. Typhimurium) is a leading cause of salmonellosis, with concerns about multidrug-resistant strains on the rise.
  • A distinct rough colony variant found in China shows a strong ability to form biofilms and exhibits higher resistance to multiple antimicrobial agents, linked to an IncHI2 plasmid with 19 resistance genes.
  • Phylogenomic analysis reveals these variants mostly belong to sublineage L6.5, which likely originated from smoother strains around 1977, with specific genetic changes contributing to their characteristics.
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  • - Mycosis fungoides (MF) is the most common type of cutaneous T-cell lymphoma, and this study assessed the safety and effectiveness of using interferon (IFN) α-2a alongside phototherapy in treating early-stage MF.
  • - Thirteen patients underwent treatment with IFN α-2a injections and phototherapy, resulting in significant improvements in their body surface area (BSA) and severity-weighted assessment tool (mSWAT) scores after 3 and 6 months, with all 13 showing positive responses.
  • - Histopathology indicated a notable decrease in atypical lymphocytes after treatment, and there were no serious side effects, suggesting that this combination therapy is a promising and safe
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Despite identifying El Niño events as a factor in dengue dynamics, predicting the oscillation of global dengue epidemics remains challenging. Here, we investigate climate indicators and worldwide dengue incidence from 1990 to 2019 using climate-driven mechanistic models. We identify a distinct indicator, the Indian Ocean basin-wide (IOBW) index, as representing the regional average of sea surface temperature anomalies in the tropical Indian Ocean.

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Human adenovirus (HAdV) infection is a major cause of respiratory disease, yet no antiviral drugs have been approved for its treatment. Herein, we evaluated the antiviral and anti-inflammatory effects of cyclin-dependent protein kinase (CDK) inhibitor indirubin-3'-monoxime (IM) against HAdV infection in cells and a transgenic mouse model. After evaluating its cytotoxicity, cytopathic effect reduction, antiviral replication kinetics, and viral yield reduction assays were performed to assess the anti-HAdV activity of IM.

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  • Metagenomic next-generation sequencing (mNGS) is a technique used to identify pathogens, but traditional methods require separate processing of DNA and RNA, making it time-consuming and resource-intensive.
  • The new method, DNA/RNA cosequencing, simplifies this process by using total nucleic acids from samples for simultaneous sequencing of DNA and RNA, improving efficiency in pathogen detection.
  • In a study involving 85 cases of severe acute respiratory infections, influenza virus was detected in 13 cases, revealing compatibility and high concordance with existing surveillance, thus enhancing capabilities for monitoring and controlling infectious diseases.
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Drug-resistant stands as a prominent pathogen in nosocomial and community-acquired infections, capable of inciting various infections at different sites in patients. This includes bacteremia (SaB), which exhibits a severe infection frequently associated with significant mortality rate of approximately 25%. In the absence of better alternative therapies, antibiotics is still the main approach for treating infections.

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Human astroviruses (HAstV) are etiologic agents of acute gastroenteritis that most often afflict young children and elderly adults. Most studies of HAstV have focused on epidemiology. In this study, we collected 10 stool samples from a diarrhea outbreak from a diarrhea sentinel surveillance hospital in Beijing.

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This study combines quantitative polymerase chain reaction (qPCR) and microfluidics to introduce MONITOR, a portable field detection system for multiple pathogens causing influenza-like illness. MONITOR can be rapidly deployed to enable simultaneous sample-in-result-out detection of eight common influenza-like illness (ILI) pathogens with heightened sensitivity and specificity. It is particularly well suited for communities and regions without centralized laboratories, offering robust technical support for the prompt and accurate monitoring and detection of ILI.

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Objectives: To investigate the resistance mechanism of a Salmonella Typhimurium (S. Typhimurium) isolated from a faecal sample of an infant, which exhibited concurrent resistance to ceftriaxone, ciprofloxacin and azithromycin.

Methods: Antimicrobial susceptibility testing was performed by broth microdilution in two kinds of drug-sensitive plates.

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China had conducted some of the most stringent public health measures to control the spread of successive SARS-CoV-2 variants. However, the effectiveness of these measures and their impacts on the associated disease burden have rarely been quantitatively assessed at the national level. To address this gap, we developed a stochastic age-stratified metapopulation model that incorporates testing, contact tracing and isolation, based on 419 million travel movements among 366 Chinese cities.

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Hypopigmented mycosis fungoides is a rare form of mycosis fungoides that is characterized by achromic lesions, early onset of disease, a predilection for darker skinned populations, and a predominance of CD8+ T cells. Due to the rarity and heterogeneous presentation of hypopigmented mycosis fungoides, there are no criteria that clearly define the clinical characteristics and treatment regimens for this condition. This retrospective study of 44 paediatric patients with hypopigmented mycosis fungoides aimed to summarize their epidemiological and clinical characteristics and assess the effectiveness and safety of different treatment regimens.

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Human adenovirus (HAdV) is a highly virulent respiratory pathogen that poses clinical challenges in terms of diagnostics and treatment. Currently, no effective therapeutic drugs or prophylactic vaccines are available for HAdV infections. One factor contributing to this deficiency is that existing animal models, including wild-type and single-receptor transgenic mice, are unsuitable for HAdV proliferation and pathology testing.

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The detrimental impact of obesity on human health is increasingly evident with the rise in obesity-related diseases. Skeletal muscle, the crucial organ responsible for energy balance metabolism, plays a significant role as a secretory organ by releasing various myokines. Among these myokines, interleukin 6 (IL-6) is closely associated with skeletal muscle contraction.

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Human astrovirus (HAstV) is a single-stranded, positive-sense RNA virus and is the leading cause of viral gastroenteritis. However, despite its prevalence, astroviruses still remain one of the least studied enteroviruses. In this study, we sequenced 11 classical astrovirus strains from clinical samples collected in Shenzhen, China from 2016 to 2019, analyzed their genetic characteristics, and deposited them into GenBank.

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Uveitis is a rare adverse event of dupilumab, that typically affects both eyes and often leads to discontinuation of therapy. In this article, we report a case of a 28-year-old female with atopic dermatitis who developed new-onset iridocyclitis, a form of uveitis, in her left eye 2 weeks after starting dupilumab treatment, which improved after reducing the dose, without discontinuing dupilumab. The patient also experienced asymptomatic hypereosinophilia, possibly related to dupilumab, which was gradually relieved without discontinuation.

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Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) infection-caused coronavirus disease 2019 (COVID-19) is a global crisis with no satisfactory therapies. Vitamin D3 (VD3) is considered a potential candidate for COVID-19 treatment; however, little information is available regarding the exact effects of VD3 on SARS-CoV-2 infection and the underlying mechanism. Herein, we confirmed that VD3 reduced SARS-CoV-2 nucleocapsid (N) protein-caused hyperinflammation in human bronchial epithelial (HBE) cells.

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Influenza A virus (IAV)-methicillin-resistant Staphylococcus aureus (MRSA) coinfection causes severe respiratory infections. The host microbiome plays an important role in respiratory tract infections. However, the relationships among the immune responses, metabolic characteristics, and respiratory microbial characteristics of IAV-MRSA coinfection have not been fully studied.

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