Modulation and real-time monitoring of the carrier-envelope phase of terahertz pulses based on shaping of near-infrared femtosecond pulses.

We propose a novel, to our knowledge, method for modulating and real-time monitoring of the carrier-envelope phase (CEP) of terahertz (THz) pulses. CEP is an essential parameter in the interaction of THz waves with matter due to the difference in temporal symmetry when the carrier is extended for several cycles. CEP can be continuously modulated at full range with high speed by oscillating the optical path length of the Michelson interferometer under 1 µm, as confirmed by electro-optic (EO) sampling.

Few-cycle THz wave manipulation with a high degree of freedom via f-t modulation.

THz waves have been intensively applied in many fields, e.g., spectroscopy, imaging, and communications.

Femtosecond X-ray spectroscopy of haem proteins.

We discuss our recently reported femtosecond (fs) X-ray emission spectroscopy results on the ligand dissociation and recombination in nitrosylmyoglobin (MbNO) in the context of previous studies on ferrous haem proteins. We also present a preliminary account of femtosecond X-ray absorption studies on MbNO, pointing to the presence of more than one species formed upon photolysis.

Generation and manipulation of polarization-twisting dual pulses with a high degree of freedom.

A polarization-twisting dual-pulse (PTDP) system is demonstrated using a modified Michelson interferometer (MI), in which a pellicle beam splitter is inserted into each arm. By tuning the positions of the end mirrors and pellicle beam splitters in the MI, the polarization-twisting frequency, the helicity, and the interval between two pulses can be individually manipulated. This PTDP generation system has a high degree of freedom in terms of tuning and has applications in the study of helicity dynamics in quantum matter, particularly in the terahertz (THz) regime.

Femtosecond X-ray emission study of the spin cross-over dynamics in haem proteins.

In haemoglobin the change from the low-spin (LS) hexacoordinated haem to the high spin (HS, S = 2) pentacoordinated domed deoxy-myoglobin (deoxyMb) form upon ligand detachment from the haem and the reverse process upon ligand binding are what ultimately drives the respiratory function. Here we probe them in the case of Myoglobin-NO (MbNO) using element- and spin-sensitive femtosecond Fe K and K X-ray emission spectroscopy at an X-ray free-electron laser (FEL). We find that the change from the LS (S = 1/2) MbNO to the HS haem occurs in ~800 fs, and that it proceeds via an intermediate (S = 1) spin state.

Polarization envelope helicity dependent photovoltage in GaAs/AlGaAs modulation-doped quantum well.

In this study, we demonstrate the switching of the direction of the photocurrent in an n-type GaAs/AlGaAs modulation-doped quantum well using a polarization pulse-shaping apparatus containing a 4f setup. The right- and left-polarization-twisting pulses with a polarization rotation frequency in the THz-regime are incident on a modulation-doped quantum well. The results show that the sign of the photovoltage is dependent on the direction of rotation of the polarization-twisting pulses, which can be explained by the circular photogalvanic effect combined with the production of a classical edge photocurrent from the acceleration of free electrons in the vicinity of the sample edge by the incident optical electric field.

Expression of a Vibrio parahaemolyticus toxin in Escherichia coli results in chromosomal DNA degradation.

A toxin-antitoxin system, vp1842/vp1843, locates within a superintegron on the Vibrio parahaemolyticus genome chromosome I whose toxin gene vp1843 encodes a DNA nicking endonuclease. We found that the vp1843 expression in Escherichia coli cells strongly induced chromosomal DNA degradation. On the basis of these observations, we discuss a possible physiological role of vp1842/vp1843 in V.

Femtosecond time-resolved X-ray absorption spectroscopy of anatase TiO nanoparticles using XFEL.

The charge-carrier dynamics of anatase TiO nanoparticles in an aqueous solution were studied by femtosecond time-resolved X-ray absorption spectroscopy using an X-ray free electron laser in combination with a synchronized ultraviolet femtosecond laser (268 nm). Using an arrival time monitor for the X-ray pulses, we obtained a temporal resolution of 170 fs. The transient X-ray absorption spectra revealed an ultrafast Ti K-edge shift and a subsequent growth of a pre-edge structure.

A RelE/ParE superfamily toxin in Vibrio parahaemolyticus has DNA nicking endonuclease activity.

Type II toxins in toxin-antitoxin (TA) systems fold into a similar fold and belong to the RelE/ParE superfamily. However, they display two distinct biochemical activities: RelE toxins are mRNA interferases, while ParE toxins are DNA gyrase (Gyr) inhibitors. Previously, we found a TA system, vp1842/vp1843, on the Vibrio parahaemolyticus genome whose toxin Vp1843 belongs to the RelE/ParE toxin superfamily.

Circularly polarized near-field optical mapping of spin-resolved quantum Hall chiral edge states.

We have successfully developed a circularly polarized near-field scanning optical microscope (NSOM) that enables us to irradiate circularly polarized light with spatial resolution below the diffraction limit. As a demonstration, we perform real-space mapping of the quantum Hall chiral edge states near the edge of a Hall-bar structure by injecting spin polarized electrons optically at low temperature. The obtained real-space mappings show that spin-polarized electrons are injected optically to the two-dimensional electron layer.

Mutations in B3GALT6, which encodes a glycosaminoglycan linker region enzyme, cause a spectrum of skeletal and connective tissue disorders.

Proteoglycans (PGs) are a major component of the extracellular matrix in many tissues and function as structural and regulatory molecules. PGs are composed of core proteins and glycosaminoglycan (GAG) side chains. The biosynthesis of GAGs starts with the linker region that consists of four sugar residues and is followed by repeating disaccharide units.

Steric effects in the scattering of oriented CH3Cl molecular beam from a Si(111) surface.

We report results of a study on steric effects appearing in the scattering of an oriented CH(3)Cl molecular beam from Si(111) at surface temperatures > or = 300 K. Data presented here show that the scattered CH(3)Cl beam intensity measured at fixed scattering angles clearly depends on the initial molecular (CH(3)Cl) orientation toward the Si surface. The scattered CH(3)Cl beam intensity for the CH(3)-end collision is larger than that for the Cl-end collision, suggesting that strong anisotropy of the interaction potential induces the molecular-orientation-dependent energy dissipation during transient trapping into a shallow potential well.

Genetic analysis of CAND1-CUL1 interactions in Arabidopsis supports a role for CAND1-mediated cycling of the SCFTIR1 complex.

SKP1-Cullin1-F-box protein (SCF) ubiquitin-ligases regulate numerous aspects of eukaryotic growth and development. Cullin-Associated and Neddylation-Dissociated (CAND1) modulates SCF function through its interactions with the CUL1 subunit. Although biochemical studies with human CAND1 suggested that CAND1 plays a negative regulatory role by sequestering CUL1 and preventing SCF complex assembly, genetic studies in Arabidopsis have shown that cand1 mutants exhibit reduced SCF activity, demonstrating that CAND1 is required for optimal SCF function in vivo.

Patellar dislocation in achondroplasia.

The knee was assessed by normal plain radiographs in 20 achondroplasia patients (40 lower extremities), whose age ranged from 10.5 to 23 years. Five patients (seven knees) had permanent patellar dislocation.

Age-related changes in BDNF protein levels in human serum: differences between autism cases and normal controls.

Accumulating evidence suggests the possible association between the concentrations of serum brain-derived neurotrophic factor (BDNF) and psychiatric disease with impaired brain development. Yet the reasons remain unclear. We therefore investigated the characteristics of serum BDNF as well as its age-related changes in healthy controls in comparison to autism cases.

A gain-of-function mutation in the Arabidopsis pleiotropic drug resistance transporter PDR9 confers resistance to auxinic herbicides.

Arabidopsis (Arabidopsis thaliana) contains 15 genes encoding members of the pleiotropic drug resistance (PDR) family of ATP-binding cassette transporters. These proteins have been speculated to be involved in the detoxification of xenobiotics, however, little experimental support of this hypothesis has been obtained to date. Here we report our characterization of the Arabidopsis PDR9 gene.

Characterization of a novel temperature-sensitive allele of the CUL1/AXR6 subunit of SCF ubiquitin-ligases.

Selective protein degradation by the ubiquitin-proteasome pathway has emerged as a key regulatory mechanism in a wide variety of cellular processes. The selective components of this pathway are the E3 ubiquitin-ligases which act downstream of the ubiquitin-activating and -conjugating enzymes to identify specific substrates for ubiquitinylation. SCF-type ubiquitin-ligases are the most abundant class of E3 enzymes in Arabidopsis.