Publications by authors named "Hernandez-Restrepo M"

(, ) species are common soil-borne fungi, endophytes, epiphytes, and saprotrophs. Sexual morphs of spp were placed in the genus , which was further segregated into the six subgenera , , , , , and . However, with the end of dual nomenclature, became the single depository for sexual and asexual morph-typified species.

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The genus Sporendonema (Gymnoascaceae, Onygenales) was introduced in 1827 with the type species S. casei for a red mould on cheese. Cheese is a consistent niche for this species.

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, and represent a complex of dematiaceous, setose, saprobic hyphomycetes that are commonly collected on plant litters in tropical, subtropical to temperate climates. Multi-locus analysis (ITS, LSU, ) and morphological studies revealed that and are polyphyletic and species belong to 10 genera grouping in three different clades within , named ( and gen. nov.

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Article Synopsis
  • The text discusses a little-understood group of soil- and wood-inhabiting fungi that reproduce through a rare process involving multiple locations and were previously classified into three sections, but recent studies show this classification is outdated.
  • A new classification proposal is introduced, recognizing these fungi as a polythetic genus with 37 species divided into eight sections, alongside the reclassification of some species into a new genus.
  • Additionally, the study highlights the ecological role of these fungi, noting their common presence in soil, association with forest habitats, and sensitivity to climate, supported by data from the GlobalFungi database.
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Seven species complexes are treated, namely species complex (FASC) (two species), species complex (FBSC) (five species), species complex (FBURSC) (three species), species complex (FCAMSC) (three species), species complex (FCSC) (eight species), species complex (FCCSC) (five species) and the species complex (FCOSC) (four species). New species include from soil (Zimbabwe), and from soil associated with (Netherlands). New combinations include and Newly validated taxa include , , , and .

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Soil fungi play a crucial role in soil quality and fertility in being able to break down organic matter but are frequently also observed to play a role as important plant pathogens. As part of a Citizen Science Project initiated by the Westerdijk Fungal Biodiversity Institute and the Utrecht University Museum, which aimed to describe novel fungal species from Dutch garden soil, the diversity of fusarioid fungi ( and other fusarioid genera), which are members of () was investigated. Preliminary analyses of ITS and LSU sequences from more than 4 750 isolates obtained indicated that 109 strains belong to this generic complex.

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The genus is a phialidic, dematiaceous hyphomycete known for its intriguing morphology and turbulent taxonomic history. This polyphasic study represents a new, comprehensive view on the taxonomy, systematics, and biogeography of and its relatives. Phylogenetic analyses of three nuclear loci confirmed that is polyphyletic.

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Recent publications have argued that there are potentially serious consequences for researchers in recognising distinct genera in the terminal fusarioid clade of the family . Thus, an alternate hypothesis, namely a very broad concept of the genus was proposed. In doing so, however, a significant body of data that supports distinct genera in based on morphology, biology, and phylogeny is disregarded.

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Novel species of fungi described in this study include those from various countries as follows: , on soil, on leaves of on leaves of on leaves of sp., on soil, (incl. gen.

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An order, family and genus are validated, seven new genera, 35 new species, two new combinations, two epitypes, two lectotypes, and 17 interesting new host and / or geographical records are introduced in this study. Validated order, family and genus: and (based on . New genera: (based on ); (based on ); (based on ); (based on ); (based on ); (based on ); (based on ).

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The genera , and (Chaetosphaeriaceae) are saprobes inhabiting decaying plant material. This study is based on an integrated morpho-molecular characterisation to assess their generic concepts and explore phylogenetic relationships. is revealed as polyphyletic, and species with 1-septate conidia and synnemata growing unilaterally along the seta are placed in the new segregate genus .

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() is a neglected, phialidic dematiaceous hyphomycete with striking phenotypic heterogeneity among its species. Little is known about its global biogeography due to its extreme scarcity and lack of records verified by molecular data. Phylogenetic analyses of six nuclear loci, supported by phenotypic data, revealed as highly polyphyletic, with species distributed among three distantly related lineages in Sordariomycetes.

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(Chaetosphaeriaceae) is a phialidic dematiaceous hyphomycete with teleomorphs classified in . It is associated with significant variability of asexual morphological traits, which led to its broad delimitation. In the present study, six loci: nuc rDNA internal transcribed spacer region ITS1-5.

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The Genera of Fungi series, of which this is the sixth contribution, links type species of fungal genera to their morphology and DNA sequence data. Five genera of microfungi are treated in this study, with new species introduced in , , and . The genus is emended and two new species and nine combinations are proposed.

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The newly discovered systematic placement of , the lectotype species of the genus, prompted a re-evaluation of the traditionally broadly conceived genus . Fresh material, axenic cultures and new DNA sequence data of five gene regions of six species, i.e.

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One order, seven families, 28 new genera, 72 new species, 13 new combinations, four epitypes, and interesting new host and / or geographical records are introduced in this study. Pseudorobillardaceae is introduced for (based on ). New genera include: (based on ) on twigs of (Germany); (based on ) on (Ukraine); (based on ) on fallen twigs of (Ukraine); (based on ) on (France) (incl.

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Fungal communities play a crucial role in maintaining the health of managed and natural soil environments, which directly or indirectly affect the properties of plants and other soil inhabitants. As part of a Citizen Science Project initiated by the Westerdijk Fungal Biodiversity Institute and the Utrecht University Museum, which aimed to describe novel fungal species from Dutch garden soil, the diversity of Didymellaceae, which is one of the largest families in the Dothideomycetes was investigated. A preliminary analysis of the ITS and LSU sequences from the obtained isolates allowed the identification of 148 strains belonging to the family.

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Background: Cutaneous phaeohyphomycosis is an emerging disease in immunocompromised patients, being Alternaria one of the most common genera reported as a causative agent. Species identification is not carried out mainly due to the complexity of the genus. Analysis of the ITS barcode has become standard for fungal identification, but in Alternaria it is only able to discriminate among species-groups or sections.

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This paper represents the third contribution in the Genera of Phytopathogenic Fungi (GOPHY) series. The series provides morphological descriptions, information about the pathology, distribution, hosts and disease symptoms for the treated genera, as well as primary and secondary DNA barcodes for the currently accepted species included in these. This third paper in the GOPHY series treats 21 genera of phytopathogenic fungi and their relatives including: , , , , , , , , , , , , , , , , , , , and .

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includes plant pathogens, animal opportunists, saprobic and endophytic fungi. The present study presents the first molecular phylogeny and revision of the genus based on four loci, including ITS, LSU, , and . An extensive collection of cultures, including ex-type strains from the CBS, IMI, MUCL, BRIP, clinical isolates from the USA, and fresh isolates from Brazil and Spain, was studied morphologically and phylogenetically to resolve their taxonomy.

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Novel species of fungi described in this study include those from various countries as follows: , and on unknown host plants. , on (incl. gen.

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includes a number of plant pathogenic, saprobic and clinically relevant fungi. Some of these species are of great importance in human activities, but the genus has never been revised in a phylogenetic framework. In this study, we revise based on available ex-type cultures from worldwide collections, observation of the holotypes and/or protologues, and additional isolates from diverse substrates and geographical origins.

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Article Synopsis
  • Two proposals have been put forward to allow DNA sequences to be used as types for naming certain fungi, which could fundamentally alter the definition of nomenclatural types and lead to various issues in scientific reproducibility and nomenclatural instability.
  • The authors argue against these proposals, suggesting that they would not effectively address the challenges of naming taxa based solely on DNA and propose instead that formulas for naming candidate taxa could be a better solution without changing existing nomenclature rules.
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This paper represents the second contribution in the Genera of Phytopathogenic Fungi (GOPHY) series. The series provides morphological descriptions and information regarding the pathology, distribution, hosts and disease symptoms for the treated genera. In addition, primary and secondary DNA barcodes for the currently accepted species are included.

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This study introduces two new families, one new genus, 22 new species, 10 new combinations, four epitypes, and 16 interesting new host and / or geographical records. (based on ) is introduced as new family, with three new combinations. (based on ) is introduced to accommodate gen.

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