Publications by authors named "Herman M Chambaro"

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  • Mutations in SARS-CoV-2 have led to the emergence of new variants with potential effects like increased spread, severity, and vaccine resistance.
  • A cross-sectional study in Zambia analyzed 76 SARS-CoV-2 samples from November 2021 to February 2022, identifying 4,097 mutations, with 1,925 occurring in the spike protein.
  • The study found 83 unique amino acid mutations in the spike proteins of various Omicron sublineages, emphasizing the need for ongoing monitoring and pandemic readiness.
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  • * A survey of poultry farmers in ten Zambian districts revealed that medium-/small-scale farmers used more antimicrobials but had fewer prescriptions compared to commercial farmers.
  • * Testing of 150 poultry isolates showed high resistance rates, especially to ampicillin and tetracycline, with the presence of extended-spectrum β-lactamase (ESBL) genes indicating significant AMR concerns in the poultry sector.
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  • Rotavirus significantly contributes to diarrhea in young children and animals globally, prompting a study on porcine rotavirus in Zambia's pig farms.
  • The research analyzed 148 stool samples, finding a 22.9% prevalence rate for rotavirus, and further genetic testing revealed strains with similarities to both porcine and human rotavirus.
  • The findings suggest potential gene reassortment and interspecies transmission between pigs and humans, advocating for a "One Health" approach to better monitor and control rotavirus in both populations.
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  • * A study in Zambia identified eighteen new species of bunyaviruses using a broad-spectrum RT-PCR method, along with RNA sequencing to analyze their genomes.
  • * Combining RT-PCR and RNA sequencing revealed a rich diversity of bunyaviruses and provided insights into the ecology of mosquitoes that consume blood.
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We describe the genetic diversity and phylogenetic relationships of Mycobacterium bovis, isolated from cattle in Malawi. Deletion analysis, spoligotyping, and MIRU-VNTR typing were used to genotype the isolates. Combined with a larger dataset from neighboring countries, the overall M.

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  • Relapsing fever (RF) is caused by Borrelia spirochetes and is a significant public health issue in endemic areas like Africa, with limited research in Zambia.
  • A study analyzed 182 DNA samples from 886 Ornithodoros ticks in Zambian National Parks, revealing 43 positive for Borrelia, including both Old and New World RF types, marking the first evidence of Old-World RF in Zambia.
  • The findings suggest at least four Borrelia species exist in Zambia, and future research should focus on isolating these species and conducting serosurveys on RF-affected patients to understand the disease's complexity better.
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The epidemiology of Rift Valley fever (RVF) is poorly understood in Malawi. Here, a cross-sectional study was conducted (March-June 2020) to investigate the seroprevalence and potential risk factors of RVF virus (RVFV) in cattle, goats, and sheep in three ecological zones of Malawi. A total of 1523 serum samples were tested for anti-RVFV IgG and IgM antibodies by ELISA.

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Nelson Bay orthoreovirus (NBV) is an emerging bat-borne virus and causes respiratory tract infections in humans sporadically. Over the last two decades, several strains genetically related to NBV were isolated from humans and various bat species, predominantly in Southeast Asia (SEA), suggesting a high prevalence of the NBV species in this region. In this study, an orthoreovirus (ORV) belonging to the NBV species was isolated from Indonesian fruit bats' feces, tentatively named Paguyaman orthoreovirus (PgORV).

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Rift valley fever (RVF) is a mosquito-borne disease of animals and humans. Although RVF outbreaks are usually reported at 5-15-year intervals in sub-Saharan Africa, Zambia has experienced an unusually long inter-epizootic/-epidemic period of more than three decades. However, serological evidence of RVF virus (RVFV) infection in domestic ruminants during this period underscores the need for comprehensive investigation of the mechanisms of virus perpetuation and disease emergence.

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The amino acid residue at position 333 of the rabies virus (RABV) glycoprotein (G333) is a major determinant of RABV pathogenicity. Virulent RABV strains possess Arg, whereas the attenuated strain HEP-Flury (HEP) possesses Glu. To investigate the potential attenuation mechanism dependent on a single amino acid at G333, comparative analysis was performed between HEP and HEPR mutant with Arg.

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  • Leishmaniases are tropical diseases affecting both humans and animals, often overlooked in healthcare discussions.
  • In Zambia, researchers found Leishmania infantum in three local mixed-breed dogs that hadn't traveled abroad.
  • This discovery indicates the possible emergence of leishmaniasis in Zambia, urging healthcare professionals to consider it in their diagnoses.
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  • Vector-borne zoonotic diseases pose significant public health risks globally, yet they are often overlooked, particularly in resource-limited countries like Zambia.
  • A review of scientific literature identified various mosquito, tick, flea, and tsetse fly-borne pathogens in Zambia, including notable viruses like Yellow fever, Zika, and several others, as well as flea and tick-borne pathogens.
  • Despite evidence of zoonotic transmission, the actual disease burden in humans remains unclear, highlighting the need for enhanced "One Health" research to better address and prevent future outbreaks in the country.
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  • Evidence of hepatitis E virus (HEV) infection in humans has been found in Zambia, but there's no prior data on its presence in domestic pigs.
  • A study tested 484 pig blood samples for HEV antibodies and examined fecal and liver samples from pigs to find the virus's genetic material.
  • The results showed a 47.7% rate of HEV antibodies and a 16% detection rate of HEV RNA in slaughtered pigs, indicating a risk to pig handlers and potential contamination of the pork supply chain.
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Rickettsial pathogens are amongst the emerging and re-emerging vector-borne zoonoses of public health importance. Though traditionally considered to be transmitted by ixodid ticks, the role of argasid ticks as vectors of these pathogens is increasingly being recognized. While bat-feeding () and chicken-feeding () argasid ticks have been shown to harbor pathogens in Zambia, there are currently no reports of infection in southern Africa from warthog-feeding () soft ticks, particularly and .

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Severe acute respiratory syndrome-coronavirus-2 (SARS-CoV-2) possesses a discriminative polybasic cleavage motif in its spike protein that is recognized by the host furin protease. Proteolytic cleavage activates the spike protein, thereby affecting both the cellular entry pathway and cell tropism of SARS-CoV-2. Here, we investigated the impact of the furin cleavage site on viral growth and pathogenesis using a hamster animal model infected with SARS-CoV-2 variants bearing mutations at the furin cleavage site (S gene mutants).

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Rabies remains endemic in Zambia. Despite conducting canine vaccinations in Lusaka district, the vaccination coverage and actual seropositivity in the dog population in Lusaka district are rarely evaluated. This study estimated the seropositivity-based immunization coverage in the owned dog population in Lusaka district using the expanded program on immunization cluster survey method.

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Background: An estimated 75% or more of the human rabies cases in Africa occur in rural settings, which underscores the importance of rabies control in these areas. Understanding dog demographics can help design strategies for rabies control and plan and conduct canine mass vaccination campaigns effectively in African countries.

Methodology/principal Findings: A cross-sectional survey was conducted to investigate domestic dog demographics in Kalambabakali, in the rural Mazabuka District of Zambia.

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  • Mycobacterium bovis (M. bovis) poses a significant public health risk by causing tuberculosis in various mammals, with limited knowledge on its presence in primates, particularly in Zambia.
  • A study in Lochinvar National Park screened wild chacma baboons for tuberculosis, revealing that M. bovis was present in multiple individuals, identified through various laboratory assays.
  • The isolates from the baboons were genetically similar to strains found in local cattle and lechwe antelopes, suggesting potential cross-species transmission and highlighting risks for both public health and wildlife conservation in the region.
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  • Tick-borne pathogens are a growing public health concern globally, with limited data on tick-borne viruses in sub-Saharan Africa.
  • In a study conducted in Zambia, 363 ticks from different species were analyzed, revealing that 5.2% of Rhipicephalus ticks harbored Shibuyunji viruses.
  • The findings indicate that Rhipicephalus ticks could act as primary hosts for Shibuyunji virus and suggest that these viruses may exist in regions beyond their original discovery.
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Bluetongue (BT) is an arthropod-borne viral disease of ruminants with serious trade and socio-economic implications. Although the disease has been reported in a number of countries in sub-Saharan Africa, there is currently no information on circulating serotypes and disease distribution in Zambia. Following surveillance for BT in domestic and wild ruminants in Zambia, BT virus (BTV) nucleic acid and antibodies were detected in eight of the 10 provinces of the country.

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African swine fever (ASF) causes persistent outbreaks in endemic and non-endemic regions in Zambia. However, the epidemiology of the disease is poorly understood, particularly during the inter-epidemic periods. We conducted surveillance for ASF in asymptomatic domestic pigs and soft ticks in selected Zambian provinces.

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We detected West Nile virus (WNV) nucleic acid in crocodiles (Crocodylus niloticus) in Zambia. Phylogenetically, the virus belonged to lineage 1a, which is predominant in the Northern Hemisphere. These data provide evidence that WNV is circulating in crocodiles in Africa and increases the risk for animal and human transmission.

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Whilst bovine leukemia virus (BLV) causes considerable economic losses to the dairy industry worldwide, information on its molecular epidemiology and economic impact in beef cattle is limited. Here, blood from 880 animals from Zambia's major cattle-rearing provinces was screened for BLV by nested PCR. Positive pools were sequenced and phylogenetically analyzed.

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Article Synopsis
  • * This study analyzed 76 RNA samples from various animals and humans to assess the genetic diversity of rabies, confirming that all strains in the region belong to the Africa 1b lineage and identifying two distinct phylogenetic clusters.
  • * The research indicated geographical separation between Zambian and Zimbabwean strains, with evidence of similar virus strains circulating in both wildlife (like jackals) and domestic animals, but no strains from Zimbabwe were found in Zambia.
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Rift Valley fever (RVF) is a zoonotic mosquito-borne disease caused by RVF virus (RVFV) that causes abortions and high mortalities in livestock and is also associated with acute and fatal disease in humans. In the Democratic Republic of Congo (DRC), information on the epidemiology of RVF is limited, particularly among cattle reared by smallholder farmers. This cross-sectional study was conducted to investigate the seroprevalence of RVF in cattle raised by smallholder farmers in Kwilu Province of DRC, which has not yet reported an RVF epidemic.

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