Publications by authors named "Herbert P"

Objective: Multiple studies have attempted to generate visual field (VF) mean deviation (MD) estimates using cross-sectional optical coherence tomography (OCT) data. However, whether such models offer any value in detecting longitudinal VF progression is unclear. We address this by developing a machine learning (ML) model to convert OCT data to MD and assessing its ability to detect longitudinal worsening.

View Article and Find Full Text PDF

Purpose: Incisional hernias (IH) after kidney transplantation (KTx) can cause significant morbidity in kidney transplant recipients (KTR). We aimed to report the outcomes of surgical repair of IH in KTR from our centre.

Methods: We retrospectively analysed all the IH repairs in KTR from May 2018 to May 2023.

View Article and Find Full Text PDF
Article Synopsis
  • - The study focuses on "DNA breathing," which refers to the local fluctuations of DNA's sugar-phosphate backbones and bases crucial for protein-DNA complex formation.
  • - A new single-molecule fluorescence method is introduced to measure the conformational changes in DNA using a special dimer-labeled probe, allowing researchers to analyze local DNA dynamics accurately.
  • - The technique employs a rotating laser to excite different exciton states of the probe, enabling the collection of detailed fluorescence data that helps explore the interaction of proteins with DNA, particularly at junctions.
View Article and Find Full Text PDF

Purpose: Compare the use of optic disc and macular optical coherence tomography measurements to predict glaucomatous visual field (VF) worsening.

Methods: Machine learning and statistical models were trained on 924 eyes (924 patients) with circumpapillary retinal nerve fiber layer (cp-RNFL) or ganglion cell inner plexiform layer (GC-IPL) thickness measurements. The probability of 24-2 VF worsening was predicted using both trend-based and event-based progression definitions of VF worsening.

View Article and Find Full Text PDF

Purpose: To determine the associations between social vulnerability index (SVI) and baseline severity, worsening, and variability of glaucoma, as assessed by visual field (VF) and OCT.

Design: Retrospective longitudinal cohort study.

Participants: Adults with glaucoma or glaucoma suspect status in 1 or both eyes.

View Article and Find Full Text PDF

DNA regulation and repair processes require direct interactions between proteins and DNA at specific sites. Local fluctuations of the sugar-phosphate backbones and bases of DNA (a form of DNA 'breathing') play a central role in such processes. Here we review the development and application of novel spectroscopic methods and analyses - both at the ensemble and single-molecule levels - to study structural and dynamic properties of exciton-coupled cyanine and fluorescent nucleobase analogue dimer-labeled DNA constructs at key positions involved in protein-DNA complex assembly and function.

View Article and Find Full Text PDF

Purpose: Develop and evaluate the performance of a deep learning model (DLM) that forecasts eyes with low future visual field (VF) variability, and study the impact of using this DLM on sample size requirements for neuroprotective trials.

Design: Retrospective cohort and simulation study.

Methods: We included 1 eye per patient with baseline reliable VFs, OCT, clinical measures (demographics, intraocular pressure, and visual acuity), and 5 subsequent reliable VFs to forecast VF variability using DLMs and perform sample size estimates.

View Article and Find Full Text PDF

Linear regression of optical coherence tomography measurements of peripapillary retinal nerve fiber layer thickness is often used to detect glaucoma progression and forecast future disease course. However, current measurement frequencies suggest that clinicians often apply linear regression to a relatively small number of measurements (e.g.

View Article and Find Full Text PDF
Article Synopsis
  • - A deep learning model (DLM) was created to predict which patients with uncontrolled glaucoma might need surgical intervention, using data from 4,898 unique eyes of 4,038 patients over an 8-year period, focusing on factors from their initial eye exams.
  • - The model was trained to forecast the likelihood of surgery within multiple time frames, showing notably high accuracy for predicting surgery within 3 months (AUC of 0.92) and effective results for forecasts up to 3 years.
  • - Analysis revealed that intraocular pressure (IOP) was consistently one of the most critical features in predicting surgery, along with mean deviation (MD) and retinal nerve fiber layer (RNFL) thickness, demonstrating the
View Article and Find Full Text PDF

Local fluctuations of the sugar-phosphate backbones and bases of DNA (often called DNA 'breathing') play a variety of critical roles in controlling the functional interactions of the DNA genome with the protein complexes that regulate it. Here, we present a single-molecule fluorescence method that we have used to measure and characterize such conformational fluctuations at and near biologically important positions in model DNA replication fork constructs labeled with exciton-coupled cyanine [(iCy3)] dimer probes. Previous work has shown that the constructs that we tested here exhibit a broad range of spectral properties at the ensemble level, and these differences can be structurally and dynamically interpreted using our present methodology at the single-molecule level.

View Article and Find Full Text PDF

Purpose: To estimate the effect of being below and above the clinician-set target intraocular pressure (IOP) on rates of glaucomatous retinal nerve fiber layer (RNFL) thinning in a treated real-world clinical population.

Design: Retrospective cohort study.

Methods: A total of 3256 eyes (1923 patients) with ≥5 reliable optical coherence tomography scans and 1 baseline visual field test were included.

View Article and Find Full Text PDF

Background: There is significant value in co-produced health research, however power-imbalances within research teams can pose a barrier to people with lived experience of an illness determining the direction of research in that area. This is especially true in eating disorder research, where the inclusion of co-production approaches lags other research areas. Appealing to principles or values can serve to ground collaborative working.

View Article and Find Full Text PDF
Article Synopsis
  • The study aimed to use a gated transformer network (GTN) to track changes in visual field (VF) data over time, focusing on glaucoma patients and different worsening definitions.
  • It involved 4211 eyes from patients monitored at Johns Hopkins, using various methods to identify VF worsening and comparing performance against traditional models.
  • Results showed the GTN excelled in predicting VF worsening, achieving a high accuracy (AUC of 0.97) compared to standard methods, indicating its potential for better diagnosis in ophthalmology.
View Article and Find Full Text PDF

Purpose: To assess whether we can forecast future rapid visual field (VF) worsening using deep learning models (DLMs) trained on early VF, OCT, and clinical data.

Design: A retrospective cohort study.

Subjects: In total, 4536 eyes from 2962 patients.

View Article and Find Full Text PDF

This is the protocol for a Campbell systematic review. The objectives are as follows: the aim is to map available evidence on the effects of digital interventions to mitigate social isolation and/or loneliness in older adults in all settings except hospital settings.

View Article and Find Full Text PDF

Background: There is controversy regarding the suitability of high body mass index (BMI) candidates accessing the transplant waitlist.

Patients And Methods: Observational study on consecutive kidney transplant recipients undergoing surgery between January 2014 and March 2016 at our center. Patients were stratified according to BMI.

View Article and Find Full Text PDF
Article Synopsis
  • The study aimed to assess how accurately glaucoma worsening can be detected over two years using different frequencies of Optical Coherence Tomography (OCT) scans and visual field (VF) tests in a large population of adults with glaucoma or at risk for it.
  • Researchers analyzed data from over 12,000 eyes using OCT and 20,000 eyes using VF from patients monitored between 2013 and 2021, focusing on rates of change in retinal nerve fiber layer thickness and mean deviation.
  • Findings revealed that the accuracy of detecting moderate and rapid glaucoma worsening was under 50%, but using both OCT and VF together significantly improved detection accuracy by over 17 percentage points compared to using either method alone
View Article and Find Full Text PDF

The processes of genome expression, regulation, and repair require direct interactions between proteins and DNA at specific sites located at and near single-stranded-double-stranded DNA (ssDNA-dsDNA) junctions. Here, we review the application of recently developed spectroscopic methods and analyses that combine linear absorbance and circular dichroism spectroscopy with nonlinear 2D fluorescence spectroscopy to study the local conformations and conformational disorder of the sugar-phosphate backbones of ssDNA-dsDNA fork constructs that have been internally labeled with exciton-coupled cyanine (iCy3) dimer probes. With the application of these methods, the (iCy3) dimer can serve as a reliable probe of the mean local conformations and conformational distributions of the sugar-phosphate backbones of dsDNA at various critical positions.

View Article and Find Full Text PDF

Glaucoma is a leading cause of irreversible blindness, and its worsening is most often monitored with visual field (VF) testing. Deep learning models (DLM) may help identify VF worsening consistently and reproducibly. In this study, we developed and investigated the performance of a DLM on a large population of glaucoma patients.

View Article and Find Full Text PDF

Purpose: Aging females are at risk of declining vascular and cognitive function. Exercise can augment both factors independently; however, the influence of exercise on their interdependence is less clearly understood. Ultrasound speckle tracking is a sensitive novel measure of arterial aging but has not previously been used in middle-aged females.

View Article and Find Full Text PDF

Purpose: To estimate the number of OCT scans necessary to detect moderate and rapid rates of retinal nerve fiber layer (RNFL) thickness worsening at different levels of accuracy using a large sample of glaucoma and glaucoma-suspect eyes.

Design: Descriptive and simulation study.

Participants: Twelve thousand one hundred fifty eyes from 7392 adult patients with glaucoma or glaucoma-suspect status followed up at the Wilmer Eye Institute from 2013 through 2021.

View Article and Find Full Text PDF

Ethnic disparities in the outcomes after simultaneous pancreas kidney (SPK) transplantation still exist. The influence of ethnicity on the outcomes of pancreas transplantation in the UK has not been reported and hence we aimed to investigate our cohort. A retrospective analysis of all pancreas transplant recipients ( = 171; Caucasians = 118/Black Asian Ethnic Minorities, BAME = 53) from 2006 to 2020 was done.

View Article and Find Full Text PDF

As people in the UK continue to live longer, the concept of healthy ageing has become increasingly important. Regular exercise that is appropriate for the ability of each individual can have several benefits for older people, such as slowing the loss of muscle mass, increasing aerobic capacity, maintaining cognitive function and improving health-related quality of life. This article explores the benefits of various forms of exercise and physical activity in older people, and offers practical advice that can assist nurses in supporting a person-centred approach to this aspect of care.

View Article and Find Full Text PDF

Increased basal low-grade inflammation is observed with advancing age, which is augmented by physical inactivity. However, data regarding the influence of lifelong exercise training and particularly high-intensity interval training (HIIT) on inflammatory mediators in older men are scarce. Therefore, we examined effects of 6weeks of aerobic preconditioning followed by 6weeks of HIIT on inflammatory mediators [interleukin (IL)-6, homocysteine, and high-sensitivity C-reactive protein (hsCRP)] in previously sedentary older men (SED) and masters athletes (LEX).

View Article and Find Full Text PDF