Hydrogen bonding is a central concept in chemistry and biochemistry, and so it continues to attract intense study. Here, we examine hydrogen bonding in the HS dimer, in comparison with the well-studied water dimer, in unprecedented detail. We record a mass-selected IR spectrum of the HS dimer in superfluid helium nanodroplets.
View Article and Find Full Text PDFHere, we report the results of an IR spectroscopy study on heteroclusters of HS and HO and several of their isotopomers using mass-selective IR spectroscopy in superfluid helium nanodroplets in the range of 2560-2800 cm. Based on DFT calculations on the B3LYP-D3/6-311++G(d,p) level of theory, we were able to assign the experimentally observed O-D stretching bands to heterodimer and heterotrimer clusters. Since no bands of the S-H-bound conformer HSH···OH could be observed, we were able to determine the O-H-bound conformer HOH···SH to be the global minimum structure.
View Article and Find Full Text PDFThe polar regions are the fastest warming places on earth. Accelerated glacial melting causes increased supply of nutrients such as metal oxides (i.e.
View Article and Find Full Text PDFThe structural arrangements of α-keto acid complexes hold significant interest across various fields of chemistry such as enzyme modeling, drug design, or polymer blending. Herein, we report mass-selective infrared (IR) spectra of pyruvic acid monomers and dimers in the range 1720-1820 cm recorded in helium nanodroplets at 0.37 K.
View Article and Find Full Text PDFResearch cruises were conducted to sample the invertebrate community along the shelf off the central coast of Oregon from 2010 to 2018. A large marine heatwave (MHW) hit the northeast Pacific in fall 2014 and persisted locally through 2015. Here, we assessed the caloric content changes of Crangon alaskensis (a common sandy shrimp) before, during, and after the 2014-2015 MHW.
View Article and Find Full Text PDFMarine permeable sediments are important sites for organic matter turnover in the coastal ocean. However, little is known about their role in trapping dissolved organic matter (DOM). Here, we examined DOM abundance and molecular compositions (9804 formulas identified) in subtidal permeable sediments along a near- to offshore gradient in the German North Sea.
View Article and Find Full Text PDFThe area around the Antarctic Peninsula (AP) is facing rapid climatic and environmental changes, with so far unknown impacts on the benthic microbial communities of the continental shelves. In this study, we investigated the impact of contrasting sea ice cover on microbial community compositions in surface sediments from five stations along the eastern shelf of the AP using 16S ribosomal RNA (rRNA) gene sequencing. Redox conditions in sediments with long ice-free periods are characterized by a prevailing ferruginous zone, whereas a comparatively broad upper oxic zone is present at the heavily ice-covered station.
View Article and Find Full Text PDFDissimilatory iron reduction (DIR) is suggested to be one of the earliest forms of microbial respiration. It plays an important role in the biogeochemical cycling of iron in modern and ancient sediments. Since microbial iron cycling is typically accompanied by iron isotope fractionation, stable iron isotopes are used as tracer for biological activity.
View Article and Find Full Text PDFA collimated light beam parallel to the axis of a fused-quartz cylinder impinging on a 90° apex angle concave cone cut in a quartz rod is transformed into a cylindrical wave by total internal reflection. A thin metal film at the quartz-air interface enables excitation of the plasmon mode at the air side that can polarize the cylindrical wave and/or has the potential to monitor physical, chemical, or biological quantities or events at the inner wall of the cone. The present Letter first analyzes the plasmon coupling mechanism and conditions.
View Article and Find Full Text PDFPermeable sandy sediments cover 50-60 % of the global continental shelf and are important bioreactors that regulate organic matter (OM) turnover and nutrient cycling in the coastal ocean. In sands, the dynamic porewater advection can cause rapid mass transfer and variable redox conditions, thus affecting OM remineralization pathways, as well as the recycling of iron and phosphorus. In this study, North Sea sands were incubated in flow-through reactors (FTRs) to investigate biogeochemical processes under porewater advection and changing redox conditions.
View Article and Find Full Text PDFAlkali metal amides are highly reactive reagents that are broadly applied as strong bases in organic synthesis. Here, we use a combined helium nanodroplet IR spectroscopic and theoretical (DFT calculation) study to show that the reaction of the model compound lithium hexamethyldisilazide (LiHMDS) with water is close to barrierless even at ultra-cold conditions. Upon complex formation of dimeric (LiHMDS) with water in helium nanodroplets as ultra-cold nano-reactors (0.
View Article and Find Full Text PDFChirality switching of self-assembled molecular structures is of potential interest for designing functional materials but is restricted by the strong interaction between the embedded molecules. Here, we report on an unusual approach based on reversible chirality changes of self-assembled oligomers using variable-temperature scanning tunneling microscopy supported by quantum mechanical calculations. Six functionalized diazomethanes each self-assemble into chiral wheel-shaped oligomers on Ag(111).
View Article and Find Full Text PDFA decisive factor for obtaining high yields and selectivities in organic synthesis is the choice of the proper solvent. Solvent selection is often guided by the intuitive understanding of transition state-solvent interactions. However, quantum-mechanical tunneling can significantly contribute to chemical reactions, circumventing the transition state and thus depriving chemists of their intuitive handle on the reaction kinetics.
View Article and Find Full Text PDFApicomplexan parasites, such as Toxoplasma gondii, are unusual in that each cell contains a single apicoplast, a plastid-like organelle that compartmentalizes enzymes involved in the essential 2C-methyl-D-erythritol 4-phosphate pathway of isoprenoid biosynthesis. The last two enzymatic steps in this organellar pathway require electrons from a redox carrier. However, the small iron-sulfur cluster-containing protein ferredoxin, a likely candidate for this function, has not been investigated in this context.
View Article and Find Full Text PDFThe present study analyzes the cyclic crack propagation behavior in an austenitic steel processed by electron beam powder bed fusion (PBF-EB). The threshold value of crack growth as well as the crack growth behavior in the Paris regime were studied. In contrast to other austenitic steels, the building direction during PBF-EB did not affect the crack propagation rate, i.
View Article and Find Full Text PDFFor many thermal reactions, the effects of catalysis or the influence of solvents on reaction rates can be rationalized by simple transition state models. This is not the case for reactions controlled by quantum tunneling, which do not proceed transition states, and therefore lack the simple concept of transition state stabilization. 1-Bicyclo[3.
View Article and Find Full Text PDFo-Tolylmethylene 1 is a metastable triplet carbene that rearranges to o-xylylene 2 even at temperatures as low as 2.7 K via [1,4] H atom tunneling. Electron paramagnetic resonance (EPR) and electron nuclear double resonance (ENDOR) spectroscopical techniques were used to identify two conformers of 1 (anti and syn) in noble gas matrices and in frozen organic solutions.
View Article and Find Full Text PDFBackground: Progressive familial intrahepatic cholestasis type 1 (PFIC1) arises from biallelic variants in the ATP8B1 gene that annul FIC1 activity, resulting in progressive liver disease. Liver transplant (LT) is indicated in refractory disease; however, post-LT complications including worsening diarrhea and steatohepatitis progressing to fibrosis with graft loss have been reported. We aim to describe long-term outcomes of PFIC1 LT recipients at our center, focusing on the histological changes of the allografts.
View Article and Find Full Text PDFResting energy expenditure (REE) is determined mainly by fat-free mass (FFM). FFM depends also on daily physical activity. REE normally decreases with increased age due to decreases in FFM and physical activity.
View Article and Find Full Text PDFThe liver is composed of different cell populations. Interactions of different cell populations can be investigated by a newly established indirect co-culture system consisting of immortalised primary human hepatocytes and human monocyte derived macrophages (MDMs). Using the time-dependent cytokine secretion of the co-cultures and single cultures, correlation networks (including the cytokines G-CSF, CCL3, MCP-1, CCL20, FGF, TGF-β1, GM-CSF, IL-8 IL-6, IL-1β, and IL-18) were generated and the correlations were validated by application of IL-8 and TNF-α-neutralising antibodies.
View Article and Find Full Text PDFMicroorganisms in marine subsurface sediments substantially contribute to global biomass. Sediments warmer than 40°C account for roughly half the marine sediment volume, but the processes mediated by microbial populations in these hard-to-access environments are poorly understood. We investigated microbial life in up to 1.
View Article and Find Full Text PDFElevated dissolved iron concentrations in the methanic zone are typical geochemical signatures of rapidly accumulating marine sediments. These sediments are often characterized by co-burial of iron oxides with recalcitrant aromatic organic matter of terrigenous origin. Thus far, iron oxides are predicted to either impede organic matter degradation, aiding its preservation, or identified to enhance organic carbon oxidation via direct electron transfer.
View Article and Find Full Text PDFThe absence of sufficient knowledge of the heterogeneous damage behaviour of textile reinforced composites, especially under combined in-plane and out-of-plane loadings, requires the development of multi-scale experimental and numerical methods. In the scope of this paper, three different types of plain weave fabrics with increasing areal weight were considered to characterise the influence of ondulation and nesting effects on the damage behaviour. Therefore an advanced new biaxial testing method has been elaborated to experimentally determine the fracture resistance at the combined biaxial loads.
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