Genetic investigations into the use of sensory evaluation: The case of boar taint discrimination in Pietrain sired crossbreds.

Using genetic selection for raising intact boars, which improves growth and feed efficiency, is a promising alternative to castration for mitigating boar taint. Selective breeding has the potential to help to identify and select for genetic lines with a reduced risk of boar taint. Common phenotypes are laboratory measurements of skatole (SKA) and androstenone (ANON) i.

The use of a genomic relationship matrix for breed assignment of cattle breeds: comparison and combination with a machine learning method.

To develop a breed assignment model, three main steps are generally followed: 1) The selection of breed informative single nucleotide polymorphism (SNP); 2) The training of a model, based on a reference population, that allows to classify animals to their breed of origin; and 3) The validation of the developed model on external animals i.e., that were not used in previous steps.

Genome-wide association for milk urea concentration in Dual-Purpose Belgian Blue cows.

The objectives of this study were to estimate genetic parameters and identify genomic regions associated with milk urea concentration (MU) in Dual-Purpose Belgian Blue (DPBB) cows. The data were 29,693 test-day records of milk yield (MY), fat yield (FY), protein yield (PY), fat percentage (FP), protein percentage (PP) and MU collected between 2014 and 2020 on 2498 first parity cows (16,935 test-day records) and 1939 second-parity cows (12,758 test-day records) from 49 herds in the Walloon Region of Belgium. Data of 28,266 single nucleotide polymorphisms (SNP), located on 29 Bos taurus autosomes (BTA), on 1699 animals (639 males and 1060 females) were used.

The pattern of linkage disequilibrium in Dual-Purpose Belgian Blue cattle.

Quantifying the level of linkage disequilibrium (LD), non-random association of alleles at two or more loci, is important to determine the number of markers needed for genomic selection. The aims of this study were to evaluate the extent of LD in Dual-Purpose Belgian Blue (DPBB) and to compare the level of LD in DPBB with that of Walloon Holstein. Data of 28,427 single nucleotide polymorphisms (SNP), located on 29 Bos taurus autosomes (BTA), of 639 DPBB and 398 Holstein bulls were used.

Development of a genomic tool for breed assignment by comparison of different classification models: Application to three local cattle breeds.

Assignment of individual cattle to a specific breed can often not rely on pedigree information. This is especially the case for local breeds for which the development of genomic assignment tools is required to allow individuals of unknown origin to be included to their herd books. A breed assignment model can be based on two specific stages: (a) the selection of breed-informative markers and (b) the assignment of individuals to a breed with a classification method.