Publications by authors named "Hanczyc P"

This study investigates the lasing effects in a Fabry-Perot cavity to discern the binding interactions of thioflavin T (ThT) with various peptides associated with Alzheimer's disease, including Aβ(1-42), KLVFFA, and diphenylalanine (FF) in the condensed phase. Utilizing kinetic lasing measurements, the research explores ThT emission enhancements due to specific groove binding in β-sheet structures and highlights additional contributions from weak surface interactions and solvent-solute interactions. Lasing spectroscopy reveals a lack of transition of the FF system from its native state to an amyloid-like structure, challenging traditional ThT assay interpretations.

View Article and Find Full Text PDF

Thioflavin T (ThT) informed microviscosity changes can be used to monitor protein aggregation. Steady-state, time-resolved and lasing spectroscopy were used to detect transient states in α-synuclein - a protein associated with Parkinson's disease. The major focus was on the nucleation phase, where conventional ThT fluorescence assay lacks appropriate sensitivity to detect early stage oligomers.

View Article and Find Full Text PDF

This study investigates the role of alkali cations in modulating the interaction between deoxyribonucleic acid (DNA) and Thioflavin T (ThT) in dilute and condensed phases. The emission characteristics of ThT were analyzed in the presence of double-stranded DNA and G-quadruplex structures with a focus on the effects of four cations: sodium, potassium, calcium, and magnesium. The ThT emission in double-stranded DNA was influenced by direct DNA binding and steric hindrance within the hydration shell of DNA, which was modulated by the presence of alkali cations.

View Article and Find Full Text PDF
Article Synopsis
  • The study explored how the lasing abilities of Thioflavin T and Thioflavin X dyes change based on solvent viscosity and DNA structure (natural, fragmented, and aggregated).
  • Key findings showed that the dye's lasing thresholds and photostability are influenced by the solvation shell, dipole moment organization driven by DNA, and molecular diffusion in the excitation area.
  • By manipulating DNA-related factors like magnesium salts, heating, and sonication, researchers significantly reduced the thresholds for amplified spontaneous emission in dye-doped DNA films, paving the way for better optical materials for solid-state lasers.
View Article and Find Full Text PDF

Two-photon excitation of emissive markers with near-infrared (NIR) light is of a particular interest for imaging in biology and medicine because NIR light is relatively weakly absorbed and scattered by tissues. At the same time the mechanism of two-photon absorption allows excitation of molecules located deep inside a scattering medium. In this work we demonstrate that the two-photon excitation combined with the effect of light amplification in the stimulated emission process provides a sensitive method for detecting amyloids of different forms.

View Article and Find Full Text PDF

There is currently no definitive test for early detection of neurodegeneration which is linked with protein aggregation. Finding methods capable of detecting intermediate states of protein aggregates, named oligomers, is critical for the early stage diagnosis of over 30 neurodegenerative diseases including Alzheimer's or Parkinson's. Currently, fluorescence-based imaging using Thioflavin T (ThT) dye is the gold standard for detecting protein aggregation.

View Article and Find Full Text PDF

The binding mechanism of thioflavin T (ThT) to DNA was studied using polarized light spectroscopy and fluorescence-based techniques in solutions and in solid films. Linear dichroism measurements showed that ThT binds to DNA duplex by intercalation. Time-resolved fluorescence studies revealed a second binding mode which is the external binding to the DNA phosphate groups.

View Article and Find Full Text PDF

Amyloid fibrils are a well-recognized hallmark of neurodegeneration. A common approach to detect amyloid fibrils is staining with organic molecules and monitoring optical properties using fluorescence spectroscopy. However, the structural diversity of amyloids necessitates new sensitive methods and probes that can be reliably used to characterize them.

View Article and Find Full Text PDF

Protein aggregation is associated with numerous devastating diseases such as Alzheimer's, Parkinson's, and prion diseases. Development of therapeutics would benefit from knowledge of the structural organization of protein molecules in these amyloid aggregates, particularly in their aqueous biological milieu. However, detailed structural studies to date have been mainly on the solid state and have required large quantities of purified aggregate.

View Article and Find Full Text PDF

Fluorescence spectroscopy is a common method for detecting amyloid fibrils in which organic fluorophores are used as markers that exhibit an increase in quantum yield upon binding. However, most of the dyes exhibit enhanced emission only when bound to mature fibrils, and significantly weaker signals are obtained in the presence of amyloid oligomers. In the concept of population inversion, a laser is used as an excitation source to keep the major fraction of molecules in the excited state to create the pathways for the occurrence of stimulated emission.

View Article and Find Full Text PDF

A stretched poly(vinyl alcohol) (PVA) film provides a unique matrix that enables also short DNA oligonucleotide duplex to be oriented and studied by linear dichroism (LD). This matrix further allows controlling DNA secondary structure by proper hydration (A or B form), and such humid films could potentially also mimic the molecular crowding in cellular contexts. However, early attempts to study intercalators and groove binders for probing DNA in PVA failed due to competitive matrix binding.

View Article and Find Full Text PDF

We report that short, synthetic, double- as well as single-stranded DNA can be aligned in stretched humid poly(vinyl alcohol) (PVA) matrix, and the secondary structure (nucleobase orientation) can be characterized with linear dichroism (LD) spectroscopy. Oligonucleotides of lengths varying between 10 (3.4 nm) and 60 bases (20.

View Article and Find Full Text PDF

We report remarkable multiphoton absorption properties of DNA intercalating ruthenium complexes: (1) [Ru(phen)(2)dppz](2+); (2) [(11,11'-bidppz)(phen)(4)Ru(2)](4+); (3) [11,11'-bipb(phen)(4)Ru(2)](4+). Two-photon spectra in the range from 460 to 1100 nm were measured using the Z-scan technique. In particular, complex 2 was found to exhibit very strong two- and three-photon absorption properties, which could be an effect of symmetric charge transfer from the ends towards the middle of the conjugated dimeric orbital system.

View Article and Find Full Text PDF

We investigate how DNA interacts with drugs in humid polyvinyl alcohol (PVA) films by using a homologous set of cyanine dyes (YO(+), YO-PRO(2+), and YOYO(4+)) known to intercalate into DNA with increasing affinity with increasing charge. UV-vis spectroscopy shows that the PVA matrix destabilizes all three DNA-dye complexes compared to aqueous solution but to a lesser degree as the dye charge increases. The monovalent YO is fully dissociated from DNA within minutes, whereas the dissociation of the divalent YO-PRO takes about one hour and occurs by a two-step mechanism.

View Article and Find Full Text PDF

Aim: To examine the effectiveness of human placental inhibitors, by injecting vitamin E to rats with transplanted Morris-5123 hepatoma, on the expression of cathepsins B and L in tumor, liver, lung and blood sera after transplantation of Morris 5123 hepatoma.

Methods: Animals were divided into 10 groups receiving three different concentrations of vitamin E and inhibitors along or in combination and compared with negative control (healthy rats) and positive control (tumor rats). Effectiveness of treatment was evaluated with regard to survival time, tumor response and determination of the activities of proteolytic enzymes and their inhibitors using flurogenic substrates.

View Article and Find Full Text PDF

We present the observation of a boy treated in our Ophthalmological Department in Wrocław from the age of 6 months up to 6 years for the serious keratitis with ulceration. We diagnosed Riley-Day syndrome with regard to many associated pathological features. The efficacy of the local treatment improved after application of soft contact lenses.

View Article and Find Full Text PDF

It is stressed that in myopia one performs 2 kinds of operation: therapeutical and for a change in refraction. Not only surgical methods but also the aim of operation are basically different. The author present the foundation, the development of the method, the up-to-date results of operation and complications connected with the radial keratotomy which is not therapeutical but refractive operation.

View Article and Find Full Text PDF

Twenty four patients with a preoperative macular detachment were subjected to a 6 months observation. The evaluation of the macular function was carried out on the basis of following examinations: the visual acuity, central visual field, dazzling test, Amsler's test and Heidinger phenomenon. The morphology of the changes was evaluated ophthalmoscopically and biomicroscopically by means of Goldmann's lens and the slit-lamp.

View Article and Find Full Text PDF

Injections of air into the anterior chamber were applied by the authors in choroidal detachment and flat anterior chamber after 22 cataract extractions and 4 fistulizing operations in glaucoma (together 26 cases) after an ineffective conservative treatment. The deepening of the anterior chamber and reapposition of the choroid was achieved in all the cases. Special attention in applying this method was called to the deepening of the anterior chamber and to supply a considerable amount of air into the eye, so as to raise the intraocular pressure up to the normal values or even more.

View Article and Find Full Text PDF

Complications of the retinal detachment surgery with the use of episcleral and intrascleral implants are presented. The authors are using biological materials (fascia lata, dura mater) as well as alloplastic materials (Lincoff's sponge). Among the postoperative complications following were seen: protracted reactions from the side of the ocular adnexa, intraocular haemorrhages, intravitreal exudates.

View Article and Find Full Text PDF

The behaviour of selected immunological parameters was checked in 38 patients with uveitis. The presence of immunological complexes was found in 23 patients and in 9 a positive Waaler-Rose's reaction. All patients showed a considerable fall in the percentage of the T lymphocytes with an increase of the B lymphocytes without markers as well as an increased concentration of the serum immunoglobulins of the M, A and G class.

View Article and Find Full Text PDF

The occurrence of circulating immunological complexes was investigated in 25 children with uveitis (11 with an anterior and 14 with posterior uveitis). The presence of complexes was found in 15 children, among them in 6 with anterior and 9 with posterior uveitis. Besides the diseased children showed a significant lowering of the percentage of the T lymphocytes by simultaneous increased percentage of B lymphocytes and also a raised concentration of the serum immunoglobulins of M, A and G class.

View Article and Find Full Text PDF

The studies involved 254 workers of a Precise Devices Plant. The impact of working conditions (chemical pollutants and lighting) on the sight organ was examined. In the test group a considerable percentage (29.

View Article and Find Full Text PDF