Spectral karyotype analysis of colon cancer cell lines of the tumor suppressor and mutator pathway.

Background And Aims: Microsatellite instability (MSI) is characterized by the size variation of microsatellites in tumor DNA as compared to matching normal DNA due to defects in the mismatch repair system. To examine the chromosomal differences in microsatellite-stable (MSS) and -unstable (MSI) tumors in detail, we analyzed MSS (Caco-2, Colo-205, SW948) and MSI (HCT-15, HCT-116, LoVo) cell lines by spectral karyotyping (SKY).

Methods: SKY is a sensitive method to detect chromosome aberrations by visualizing each chromosome in a different color.