Publications by authors named "Guillaume Fournier"

Article Synopsis
  • The study analyzes the impact of the COVID-19 pandemic on the epidemiology of respiratory syncytial virus (RSV) in Europe from October 2020 to September 2022.
  • Data from multiple surveillance systems showed a significant drop in RSV detections during the 2020/21 season, followed by a gradual increase in 2021 and notable peaks in 2021/22.
  • Despite increased testing, RSV patterns were disrupted, with unusual circulation trends observed, indicating that normalization of RSV activity had not been achieved by the 2022/23 season.
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In 2018, an upsurge in echovirus 30 (E30) infections was reported in Europe. We conducted a large-scale epidemiologic and evolutionary study of 1,329 E30 strains collected in 22 countries in Europe during 2016-2018. Most E30 cases affected persons 0-4 years of age (29%) and 25-34 years of age (27%).

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Article Synopsis
  • Influenza A viruses (IAVs) disrupt cellular gene expression by affecting mRNA splicing in human lung cells, leading to increased exon inclusion and decreased intron retention.
  • More than half of the altered mRNAs in IAV-infected cells show splicing changes without significant shifts in overall abundance, indicating IAVs specifically manipulate this process.
  • The study also highlights that certain alternative splicing events are unique to IAV infection and suggests that IAVs may hijack specific cellular proteins, like RED, to enhance viral mRNA splicing at the expense of host mRNA processing.
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New therapeutic strategies targeting influenza are actively sought due to limitations in current drugs available. Host-directed therapy is an emerging concept to target host functions involved in pathogen life cycles and/or pathogenesis, rather than pathogen components themselves. From this perspective, we focused on an essential host partner of influenza viruses, the RED-SMU1 splicing complex.

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Transmission electron microscopy (TEM) has been instrumental for studying viral infections. In particular, methods for labeling macromolecules at the ultrastructural level, by integrating biochemistry, molecular biology, and morphology, have allowed to study the functions of viral macromolecular complexes within the cellular context. Here, we describe a strategy for imaging influenza virus ribonucleoproteins in infected cells with two complementary labeling methods, metal-tagging transmission electron microscopy or METTEM, a highly sensitive technique based on the use of a metal-binding protein as a clonable tag, and immunogold labeling on thawed cryosections, a very specific labeling method that allows to study the distribution of different proteins simultaneously.

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Transport of neo-synthesized influenza A virus (IAV) viral ribonucleoproteins (vRNPs) from the nucleus to the plasma membrane involves Rab 11 but the precise mechanism remains poorly understood. We used metal-tagging and immunolabeling to visualize viral proteins and cellular endomembrane markers by electron microscopy of IAV-infected cells. Unexpectedly, we provide evidence that the vRNP components and the Rab11 protein are present at the membrane of a modified, tubulated endoplasmic reticulum (ER) that extends all throughout the cell, and on irregularly coated vesicles (ICVs).

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Article Synopsis
  • The influenza polymerase (FluPol) is crucial for viral RNA transcription and replication, binding to specific regions of the viral RNA.
  • A new co-crystal structure reveals how the PA subunit of FluPol interacts with RNA polymerase II, specifically through distinct binding sites for phosphorylated components (SeP5).
  • Mutations in the binding sites can impair polymerase activity and virus stability, suggesting that targeting these interactions could lead to potential antiviral strategies.
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Enhancing the knowledge of host factors that are required for efficient influenza A virus (IAV) replication is essential to address questions related to pathogenicity and to identify targets for antiviral drug development. Here we focused on the interplay between IAV and DExD-box RNA helicases (DDX), which play a key role in cellular RNA metabolism by remodeling RNA-RNA or RNA-protein complexes. We performed a targeted RNAi screen on 35 human DDX proteins to identify those involved in IAV life cycle.

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Cyprinid herpesvirus 3 (CyHV 3) is causing severe economic losses worldwide in common and koi carp industries, and a safe and efficacious attenuated vaccine compatible with mass vaccination is needed. We produced single deleted recombinants using prokaryotic mutagenesis. When producing a recombinant lacking open reading frame 134 (ORF134), we unexpectedly obtained a clone with additional deletion of ORF56 and ORF57.

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Influenza A viruses are major pathogens in humans and in animals, whose genome consists of eight single-stranded RNA segments of negative polarity. Viral mRNAs are synthesized by the viral RNA-dependent RNA polymerase in the nucleus of infected cells, in close association with the cellular transcriptional machinery. Two proteins essential for viral multiplication, the exportin NS2/NEP and the ion channel protein M2, are produced by splicing of the NS1 and M1 mRNAs, respectively.

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Article Synopsis
  • Cyprinid herpesvirus 3 (CyHV-3) causes a serious disease in common and koi carp.
  • A specific gene, ORF134, was studied and found to be a common protein in the virus that doesn't help it reproduce or make fish sick.
  • The experiments using different virus types showed that fish got sick the same way no matter if the ORF134 gene was missing or present.
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Cyprinid herpesvirus 3 (CyHV-3), also known as Koi herpesvirus, is the etiological agent of a mortal disease in common and koi carp. Recently, we investigated the entry of CyHV-3 in carp using bioluminescence imaging and a CyHV-3 recombinant strain expressing luciferase (LUC). We demonstrated that the skin is the major portal of entry after inoculation of carp by immersion in water containing CyHV-3.

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Article Synopsis
  • - Cyprinid herpesvirus 3 (CyHV-3) causes a deadly and highly contagious disease in common and koi carp, primarily entering through the skin when fish immerse in contaminated water.
  • - The study discovered that removing skin mucus and creating lesions enhanced the entry of CyHV-3, demonstrating that mucus acts as a barrier against the virus.
  • - Mucus extract was found to reduce the virus's infectivity in a lab setting, emphasizing the skin mucus's critical role in the fish's innate immune defense against viral infections.
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The recently designated cyprinid herpesvirus 3 (CyHV-3) is an emerging agent that causes fatal disease in common and koi carp. Since its emergence in the late 1990s, this highly contagious pathogen has caused severe financial losses in common and koi carp culture industries worldwide. In addition to its economic role, recent studies suggest that CyHV-3 may have a role in fundamental research.

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