Publications by authors named "Guang-Xin Liu"

Article Synopsis
  • Scylla paramamosain, an important crab species in aquaculture, is increasingly threatened by the highly pathogenic mud crab dicistrovirus-1 (MCDV-1), which disrupts its cultivation due to viral diseases.
  • A study analyzed the immune response of infected mud crabs, revealing 5,139 differentially expressed genes and highlighting pathways related to humoral immunity that the crabs activate to combat MCDV-1, while also showing disruptions in metabolic processes.
  • The research identified 9 key hub genes linked to viral endocytosis, indicating that MCDV-1 may utilize this process to enter crab cells and replicate, marking a significant step in understanding the viral
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Localized surface plasmon resonances (LSPRs) can enhance the electromagnetic fields on metallic nanostructures upon light illumination, providing an approach for manipulating light-matter interactions at the sub-wavelength scale. However, currently, there is no thorough investigation of the physical mechanism in the dynamic formation of the strongly coupled LSPRs on sub-5 nm plasmonic cavities at the sub-picosecond scale. In this work, through femtosecond broadband transient absorption spectroscopy, we reveal the dynamic ultrastrong coupling processes in a nanoparticle-in-trench (NPiT) structure containing 2 nm gap cavities, and demonstrate a coherent motional coupling between vibrating AuNPs and the nanogaps.

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Laminin receptor (LR), which mediating cell adhesion to the extracellular matrix, plays a crucial role in cell signaling and regulatory functions. In the present study, a laminin receptor gene (SpLR) was cloned and characterized from the mud crab (Scylla paramamosain). The full length of SpLR contained an open reading frame (ORF) of 960 bp encoding 319 amino acids, a 5' untranslated region (UTR) of 66 bp and a 3' UTR of 49 bp.

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Spatiotemporal mode-locked (STML) fiber lasers have become a new platform for investigating nonlinear phenomena. In this work, spatiotemporal dual-periodic soliton pulsation (SDSP) is firstly observed in an STML fiber laser. It is found that in the SDSP, the long-period pulsations (LPPs) of different transverse modes are synchronous, while the short-period pulsations (SPPs) exhibit asynchronous modulations.

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Multimode fiber lasers have become a new platform for investigating nonlinear phenomena since the report on spatiotemporal mode-locking. In this work, the multimode soliton pulsation with a tunable period is achieved in a spatiotemporal mode-locked fiber laser. It demonstrates that the pulsation period drops while increasing the pump power.

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Hypoxia-inducible factors -1 (HIF-1) is a crucial transcription factor that regulates the expression of glycolytic genes. Our previous study proved that the Mud crab dicistrovirus-1 (MCDV-1) can induce aerobic glycolysis that favors viral replication in mud crab Scylla paramamosain. However, the role of HIF-1 on key glycolytic genes during the MCDV-1 infection has not been examined.

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Activating transcription factor 6 (ATF6) is critical for regulation of unfolded protein response (UPR), which is involved in the endoplasmic reticulum (ER) proteostasis maintenance and cellular redox regulation. In the present study, a ATF6 gene from the mud crab (designated as Sp-ATF6) has been cloned and identified. The open reading frame of Sp-ATF6 was 1917 bp, encoding a protein of 638 amino acids.

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Heat shock proteins play an important role in host defense, and modulate immune responses against pathogen infection. In this study, a novel HSC70 from the mud crab (designated as SpHSC70) was cloned and characterized. The full length of SpHSC70 contained a 58 bp 5'untranslated region (UTR), an open reading frame (ORF) of 2,046 bp and a 3'UTR of 341 bp.

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We report, for the first time to the best of our knowledge, a spatiotemporal mode-locked (STML) multimode fiber laser based on nonlinear amplifying loop mirror (NALM), generating dissipative soliton resonance (DSR) pulses. Due to the complex filtering characteristics caused by the inherent multimode interference filtering structure and NALM in the cavity, the STML DSR pulse has wavelength tunable function. What's more, kinds of DSR pulses are also achieved, including multiple DSR pulses, and the period doubling bifurcations of single DSR pulse and multiple DSR pulses.

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Article Synopsis
  • Prolyl hydroxylase 2 (PHD2) serves as the main oxygen sensor regulating HIF-1α stability, and researchers identified a novel PHD2 gene called SpPHD2 from the mud crab Scylla paramamosain, revealing its full transcript length of 1926 bp.
  • The SpPHD2 protein features key structural domains and is broadly expressed in various tissues, with its localization primarily in the cytoplasm.
  • Silencing SpPHD2 increased levels of SpHIF-1α and associated genes, while overexpression decreased SpHIF-1α activity; additionally, SpPHD2 expression rises under low oxygen conditions, suggesting a feedback loop in regulating hypoxia responses.
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Recent advances in inverse-design approaches for discovering optical structures based on desired functional characteristics have reshaped the landscape of nanophotonic structures, where most studies have focused on how light interacts with nanophotonic structures only. When quantum emitters (QEs), such as atoms, molecules, and quantum dots, are introduced to couple to the nanophotonic structures, the light-matter interactions become much more complicated, forming a rapidly developing field - quantum nanophotonics. Typical quantum functional characteristics depend on the intrinsic properties of the QE and its electromagnetic environment created by the nanophotonic structures, commonly represented by a scalar quantity, local-density-of-states (LDOS).

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The transcription factor Nrf2 plays vital roles in detoxification and antioxidant enzymes against oxidative stress. However, the function of Nrf2 in crustaceans is not well studied. In this study, a novel Nrf2 gene from the mud crab (Sp-Nrf2) was identified.

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Cadmium is one of hazardous pollutants that has a great threat to aquatic organisms and ecosystems. The intestine plays important roles in barrier function and immunity to defend against environmental stress. However, whether cadmium exposure caused the intestine injury is not well studied.

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Cytochrome P450 (CYPs) enzymes are one of the critical detoxification enzymes, playing a key role in antioxidant defense. However, the information of CYPs cDNA sequences and their functions are lacked in crustaceans. In this study, a novel full-length of CYP2 from the mud crab (designated as Sp-CYP2) was cloned and characterized.

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Glutaredoxin (Grx) is a glutathione-dependent oxidoreductase that plays a key role in antioxidant defense. In this study, a novel Grx2 gene (SpGrx2) was identified from the mud crab Scylla paramamosain, which consists of a 196 bp 5' untranslated region, a 357 bp open reading frame, and a 964 bp 3' untranslated region. The putative SpGrx2 protein has a typical single Grx domain with the active center sequence C-P-Y-C.

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Hypoxia is a major environmental stressor that can damage the oxidation metabolism of crustaceans. Glutaredoxin (Grx) is a key member of the thioredoxin superfamily and plays an important role in the host's defense against oxidative stress. At present, the role of Grx in response to hypoxia in crustaceans remains unclear.

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Article Synopsis
  • * The study successfully cloned and characterized a new variant of Grx (Sp-Grx 5) in mud crabs, revealing it to have a unique sequence and high expression levels in specific tissues like the hepatopancreas.
  • * Sp-Grx 5 expression increases significantly when crabs face stressors like infection or toxins, indicating its involvement in immune response and detoxification, while also enhancing cell survival under oxidative stress.
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We report a narrow bandwidth spatiotemporal mode-locked (STML) ytterbium-doped fiber laser, based on a homemade carbon nanotube/polyvinyl alcohol composite film and the multimode interference filtering effect. The wavelength-tunable narrow bandwidth STML operations combined with different pulse states are achieved, including single pulse, multiple pulses, and harmonics. The 3-dB bandwidth at the single-pulse state is 103 pm, while at the harmonic state, it is as narrow as 26 pm.

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Mud crab reovirus (MCRV) is a serious pathogen that leads to large economic losses in the mud crab farming. However, the molecular mechanism of the immune response after MCRV infection is unclear. In the present study, physiological, transcriptomic, and metabolomic responses after MCRV infection were investigated.

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Article Synopsis
  • Phosphofructokinase (PFK) is a crucial enzyme in glycolysis, and researchers have cloned and studied a specific PFK gene (SpPFK) from the mud crab Scylla paramamosain.
  • The SpPFK gene consists of 249 bp of 5' UTR, a 2,859 bp open reading frame, and 1,248 bp of 3' UTR, with high expression levels in the gill, hemocytes, and muscle, especially after infection with mud crab dicistrovirus-1 (MCDV-1).
  • Knocking down SpPFK through RNA interference was shown to lower lactate dehydrogenase levels, enhance survival rates in
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Article Synopsis
  • Apoptosis is crucial for the immune defense against infections, and caspase 3, a family of proteins, plays a key role in this process.
  • The full-length caspase 3 from mud crab (Sp-caspase 3) was cloned, characterized, and found to be expressed widely, especially in hemocytes, with its activity located in both the cytoplasm and nucleus.
  • Over-expressing Sp-caspase 3 can induce cell death and its expression increases during infection with V. Parahaemolyticus, while knocking it down reduces apoptosis and increases crab mortality.
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Oxidative stress is considered as the toxicity mechanism of environmental stressors on aquatic organisms. This study aims to explore the effects of oxidative stress on physiological responses, DNA damage and transcriptional profiles of the mud crabs Scylla paramamosain. In the present study, mud crabs were injected with 0.

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Mud crab (Scylla paramamosain) is an economically important cultured species in China. Hypoxia is a major environmental stressor during mud crab culture. In the present study, we investigated the oxidative stress and transcriptome changes in the gills of mud crab after intermediate hypoxia stress with dissolved oxygen (DO) 3.

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Article Synopsis
  • The study identified and characterized the p53 gene (Sp-53) in the mud crab, showing it is vital for DNA repair, cell cycle regulation, and maintaining genetic stability.
  • Sp-53 is expressed in all tissues, especially in the hepatopancreas and hemocytes, and its expression increases significantly after infection with Vibrio parahaemolyticus, leading to oxidative stress and DNA damage.
  • Knocking down Sp-53 through RNA interference resulted in lower antioxidant and apoptosis-related gene expression, higher crab mortality, and increased DNA damage, indicating Sp-53's crucial role in managing infections and cellular damage.
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This research is to predict anti-Alzheimer's disease active constituents on the target of acetylcholinesterase(AChE) from Glycyrrhizae Radix et Rhizoma with the help of pharmacophore and molecular docking. AChE ligand-based pharmacophore model was set up and the molecular library of the constituents from Glycyrrhizae Radix et Rhizoma were established by collecting literature. Then the constituents from Glycyrrhizae Radix et Rhizoma were screen for the potential AChE inhibitory potency in silico through matching with the best pharmacophore model.

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