Ultra-high pressure slalom chromatography: Application to the characterization of large DNA and RNA samples relevant in cell and gene therapy.

Slalom chromatography (SC), initially co-discovered by Boyes and Kasai in the late 1980s, has recently re-emerged as a breakthrough technique to rapidly analyze DNA samples. With the development of cutting-edge ultra-high pressure liquid chromatography (UHPLC) systems and columns, SC now offers enhanced resolution and sensitivity for analyzing large DNA samples. By revisiting the fundamentals of the SC retention mechanism (non-equilibrium separation mode) and considering the physicochemical properties of DNA biopolymers (contour length, extension under shear flow, relaxation time), we provide analytical chemists with a general strategy and framework for selecting the most relevant applications in the expanding field of cell and gene therapy.

Theoretical predictions to facilitate the method development in slalom chromatography for the separation of large DNA molecules.

Slalom chromatography (SC) re-emerged in 2024 due to the availability of low adsorption ultra-high pressure liquid chromatography (UHPLC) packed columns/instruments and large modalities being investigated in the context of cell and gene therapies. The physico-chemical principles of SC retention combined with hydrodynamic chromatography (HDC) exclusion have been recently reported. In SC, DNA macromolecules are retarded because: (1) they can be stretched to lengths comparable to the particle diameter, and (2) their elastic relaxation time is long enough to maintain them in non-equilibrium extended conformations under regular UHPLC shear flow conditions.

Harnessing an elastic flow instability to improve the kinetic performance of chromatographic columns.

Despite decades of research and development, the optimal efficiency of slurry-packed HPLC columns is still hindered by inherent long-range flow heterogeneity from the wall to the central bulk region of these columns. Here, we show an example of how this issue can be addressed through the straightforward addition of a semidilute amount (500 ppm) of a large, flexible, synthetic polymer (18 MDa partially hydrolyzed polyacrylamide, HPAM) to the mobile phase (1% NaCl aqueous solution, hereafter referred to as "brine") during operation of a 4.6 mm × 300 mm column packed with 10μm BEH 125 Å particles.

Understanding retention and intra-particle diffusivity of alkylsulfobetaine-bonded Ethylene Bridged Particles with different mesopore sizes for hydrophilic interaction liquid chromatography applications.

The role of the average pore diameter (APD) of 1.7μm Atlantis Premier BEH Particles derivatized with a zwitterionic group (propylsulfobetaine) on the efficiency of their 2.1 × 50 mm hydrophilic interaction liquid chromatography (HILIC) packed columns is investigated experimentally.

Retention mechanism in combined hydrodynamic and slalom chromatography for analyzing large nucleic acid biopolymers relevant to cell and gene therapies.

Slalom chromatography (SC) was discovered in 1988 for analyzing double-stranded (ds) DNA. However, its progress was impeded by practical issues such as low-purity particles, sample loss, and lack of a clear retention mechanism. With the rise of cell and gene therapies and the availability today of bio-inert ultra-high-pressure liquid chromatography (UHPLC) columns and systems, SC has regained interest.

Preparation and investigation of two-component silica-modified hydrophobic layer for minimizing retention loss of reversed-phase chromatographic columns using fully aqueous mobile phases.

Chromatographers often employ fully aqueous mobile phases to retain highly polar compounds in reversed-phase liquid chromatography (RPLC). However, when the flow rate is interrupted, either accidentally or intentionally, a substantial loss in retention occurs due to the spontaneous dewetting of water from the hydrophobic surface of conventional RPLC-C particles. Previous studies have shown that maintaining a low C surface coverage (approximately 1.

Physical origin of the peak tailing of monoclonal antibodies in size-exclusion chromatography using bio-compatible systems and columns.

The analysis of mixtures containing monoclonal antibody (mAb) (approximately 150 kDa molecular weight) and sub-unit impurities (approximately 100 kDa) is challenging, even when adopting the latest ultra-high-pressure liquid chromatography (UHPLC) columns (4.6 mm [Formula: see text] 150 mm coated hardware, 1.7 [Formula: see text]m 250 BEH[Formula: see text] Surface-modified Particles) and systems (ACQUITY[Formula: see text] UPLC[Formula: see text] I-class Bio Plus).

Non-Invasive Ventilation Reduces Postoperative Respiratory Failure in Patients Undergoing Bariatric Surgery: A Retrospective Analysis.

: Postoperative non-invasive ventilation (NIV) has been proposed as an attractive strategy to reduce morbidity in obese subjects undergoing general anaesthesia. The increased body mass index (BMI) correlates with loss of perioperative functional residual capacity, expiratory reserve volume, and total lung capacity. The aim of the current study is to evaluate the efficacy of NIV in a post-anaesthesia care unit (PACU) in reducing post-extubation acute respiratory failure (ARF) after biliointestinal bypass (BIBP) in obese patients.

Resolution limits of size exclusion chromatography columns identified from flow reversal and overcome by recycling liquid chromatography to improve the characterization of manufactured monoclonal antibodies.

The flow reversal (FR) technique consists of reversing the flow direction along a chromatographic column. It is used to reveal the origin (such as poor column packing, active sites, or slow absorption/escape kinetics) for the resolution limit of 4.6 mm × 150 mm long columns packed with 1.

Absorption and escape kinetics of spherical biomolecules from fully porous particles utilized in size exclusion chromatography.

The increasing demand for the characterization of large biomolecules such as monoclonal antibodies, double-stranded deoxyribonucleic acid (dsDNA), and virus-like particles (VLPs) is raising fundamental questions pertaining to their absorption (ingress) and escape (egress) kinetics from fully porous particles. The exact expression of their concentration profiles is derived as a function of time and radial position across a single sub-3 μm Bridge-Ethylene-Hybrid (BEH) Particle present in size exclusion chromatography (SEC) columns. The boundary condition at the external surface area of the particle is a rectangular concentration profile mimicking the passage of the chromatographic zone.

Multiple-open-tubular column enabling transverse diffusion. Part 3: Simulation of solute dispersion along a real three dimensional-printed column with quadratic channels.

Multiple-open-tubular columns enabling transverse diffusion (MOTTD) consist of straight and parallel flow-through channels separated by a mesoporous stationary phase. In Part 1, a stochastic model of band broadening along MOTTD columns accounting for longitudinal diffusion, trans-channel velocity bias, and mass transfer resistance in the stationary phase was derived to demonstrate the intrinsic advantage of MOTTD columns over classical particulate columns. In Part 2, the model was refined for the critical contribution of the channel-to-channel polydispersity and applied to address the best trade-off between analysis speed and performance.

Retention and mass transfer properties of the series of unbonded, amide-bonded, and alkylsulfobetaine-bonded ethylene bridged hybrid hydrophilic interaction liquid chromatography columns.

This work investigates the link between the retentivity and the stationary phase to mobile phase mass transfer resistance of hydrophilic interaction liquid chromatography (HILIC) columns packed with the same base ethylene-bridged hybrid particles (BEH). The retention volumes, the plate heights, and the volume of the adsorbed water layer were measured for the ACQUITY UPLC BEH 130 Å HILIC Column (unbonded BEH), ACQUITY UPLC BEH 130 Å Amide Column (amide group attached), and Atlantis Premier BEH 95 Å Z-HILIC (zwitterionic group attached) Column. The method of Guo (toluene retention volumes in pure acetonitrile and in the HILIC eluent) was validated from the UNIFAC group-contribution method and applied to measure accurately the water layer volumes in these columns.

Prediction of surface excess adsorption and retention factors in reversed-phase liquid chromatography from molecular dynamics simulations.

An alternative method to the classical fit of semi-empirical, statistical, or artificial intelligence-based models to retention data is proposed to predict surface excess adsorption and retention factors in liquid chromatography. The approach is based on a fundamental, microscopic description of the liquid-to-solid adsorption of analytes taking place at the interface between a bulk liquid phase and a solid surface. Molecular dynamics (MD) simulations are performed at T=300 K in a 100 Å wide slit-pore model (β-cristobalite-C surface in contact with an acetonitrile/water mobile phase) to quantify a priori the retention factors of small molecules expected in reversed phase liquid chromatography (RPLC).

Modeling of the transient diffusion regime in fully porous particles-Application to the analysis of large biomolecules by ultra-high pressure liquid chromatography.

The transient diffusion regime of large biomolecules such as monoclonal antibodies, double-stranded (ds) DNA (base pair number ∼ 100), and virus-like particles is modeled in a single fully porous particle utilized as size exclusion chromatography (SEC) packing materials in ultra-high pressure liquid chromatography (UHPLC). The expression of the time and space dependent concentration profiles is derived for a step concentration change. Four different UHPLC particles were considered in the calculations depending on the size of the analyte : 2.

Model of retention time and density of gradient peak capacity for improved LC-MS method optimization: Application to metabolomics.

A general and deterministic model is derived from the fundamentals of liquid chromatography to calculate retention time, peak width, peak capacity, and density of peak capacity in gradient liquid chromatography. The calculation of these chromatographic properties accounts for 1) the presence of initial (separation of the earliest eluters) and final (column wash) isocratic steps before and after the linear gradient, respectively, 2) the pre- (flow through needle and preheater tubes) and post-column (outlet and emitter tubes before MS detection) dispersion, 3) the compression of the chromatographic band, and 4) the retention of the organic modifier onto the RPLC column. The multiple and variable method parameters may include the column dimensions, particle size, flow rate, temperature, initial and final isocratic hold times, gradient time, gradient steepness, column conditioning/sample load time, and the pre- and post-column tube dimensions.

On the road toward highly efficient and large volume three-dimensional-printed liquid chromatography columns?

The current performance of commercially packed liquid chromatography columns is limited by the random structure of the packed bed and by the wall-to-center heterogeneity of its structure. The minimum reduced plate heights observed are not smaller than 1.4, whereas they could theoretically be as low as 0.

Extraction of intrinsic column peak profiles of narrow-bore and microbore columns by peak deconvolution methods.

The intrinsic peak profiles (free from the delay and dispersion caused by state-of-the art UHPLC systems) generated by narrow-bore and microbore chromatographic columns used in liquid chromatography-mass spectrometry (LC-MS) proteomic analyses are extracted from two different deconvolution methods. The first method is based on the classical discrete Fourier transform (DFT) while the second method refers to the Taylor expansion of the continuous Fourier transform (FT). The two numerical methods are compared regarding the accurate determination of the intrinsic peak profiles of the non-retained compound (toluene) expected on a narrow-bore 2.

Theoretical framework for mixer design for noise reduction and gradient fidelity.

The mixing of two or more solvent streams to deliver a stable and accurate solvent composition is crucial to the performance, repeatability and reproducibility of a liquid chromatographic separation. We provide a theoretical treatment of axial mixing of a sequence of solvent packets with the framework of continuous stirred tank reactors (CSTRs) in series and investigate the tradeoffs presented between the primary goal of mixers (noise reduction) and it's necessary side-effects of gradient deformation and asymmetry. An experimental setup to mimic CSTR conditions was created using a stop-flow setup where the fluid flow was periodically paused and sonicated within pods of a certain volume.

Rebirth of recycling liquid chromatography with modern chromatographic columns : Extension to gradient elution.

Twin column recycling semi-preparative liquid chromatography (TCRLC) is revived to prepare small amount (∼ 1 mg) of a pure targeted compound, which cannot be isolated by conventional preparative liquid chromatography. In this work, TCRLC is extended to gradient elution. The first step of this modified process consists of a gradient step, which eliminates both early and late impurities.

Theoretical study of the efficiency of liquid chromatography columns with particle size gradient.

Modern analytical applications of liquid chromatography require more and more efficient columns. In this work, the possibility of utilizing particle size gradient in the chromatographic column was studied by a theoretical approach. In the course of our work three different scenarios of particle size gradients were considered with different shapes (linear, convex and concave).

Mitigation of analyte loss on metal surfaces in liquid chromatography.

The adsorptive loss of acidic analytes in liquid chromatography was investigated using metal frits. Repetitive injections of acidic small molecules or an oligonucleotide were made on individual 2.1 or 4.

Decapneization as supportive therapy for the treatment of status asthmaticus: a case report.

Background: Acute severe asthma is a life-threatening medical emergency. Characteristics of asthma include increased airway resistance and dynamic pulmonary hyperinflation that can manifest in dangerous levels of hypercapnia and acidosis, with significant mortality and morbidity. Severe respiratory distress can lead to endotracheal intubation followed by mechanical ventilation, which can cause increased air trapping with dynamic hyperinflation, predisposing the lungs to barotraumas.

Perspective on the Future Approaches to Predict Retention in Liquid Chromatography.

The demand for rapid column screening, computer-assisted method development and method transfer, and unambiguous compound identification by LC/MS analyses has pushed analysts to adopt experimental protocols and software for the accurate prediction of the retention time in liquid chromatography (LC). This Perspective discusses the classical approaches used to predict retention times in LC over the last three decades and proposes future requirements to increase their accuracy. First, inverse methods for retention prediction are essentially applied during screening and gradient method optimization: a minimum number of experiments or design of experiments (DoE) is run to train and calibrate a model (either purely statistical or based on the principles and fundamentals of liquid chromatography) by a mere fitting process.

Multiple-open-tubular column enabling transverse diffusion. Part 2: Channel size distribution and structure optimization.

Multiple-open-tubular columns enabling transverse diffusion (MOTTD) are made of straight, parallel, and cylindrical flow channels separated by a mesoporous stationary phase. In Part 1, a model of band broadening along MOTTD columns accounting for longitudinal diffusion, the trans-channel velocity bias, and mass transfer resistance in the stationary phase was proposed and validated. In this Part 2, the model is completed by considering the impact of short-range inter-channel velocity biases on the MOTTD plate number.