Publications by authors named "Graeme Oatley"

Article Synopsis
  • Researchers have assembled the complete genome of the smooth giant clam, measuring 1,060.2 megabases.
  • The genome consists of 18 chromosomal pseudomolecules, providing a structured representation of its DNA.
  • The study identified 19,638 protein-coding genes and included a 24.95 kilobase mitochondrial genome in the analysis.
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Article Synopsis
  • A genome assembly was completed for the heart cockle, a type of bivalve mollusk, with a total sequence length of 1,206.1 megabases.
  • The assembly is organized into 19 chromosomal pseudomolecules, and the mitochondrial genome measures 92.77 kilobases.
  • Gene annotation revealed 70,309 protein-coding genes in the assembled genome, as documented in Ensembl.
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Article Synopsis
  • A genome assembly has been created from a single individual of a heart cockle (part of the mollusk family).
  • The genome spans 1,153.1 megabases and has been organized into 19 chromosomal pseudomolecules, along with a 22.36 kilobase mitochondrial genome.
  • Gene annotation revealed a total of 17,262 protein-coding genes in this assembly, as identified on Ensembl.
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We present the genome assembly of the pennate diatom strain UHM3201 (Ochrophyta; Bacillariophyceae; Rhopalodiales; Rhopalodiaceae) and that of its cyanobacterial endosymbiont (Chroococcales: Aphanothecaceae). The genome sequence of the diatom is 60.3 megabases in span, and the cyanobacterial genome has a length of 2.

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Article Synopsis
  • A detailed chromosomal-level genome assembly for the giant clam has been completed, measuring 1,175.9 megabases.
  • The assembly is organized into 17 chromosomal pseudomolecules, and the mitochondrial genome spans 25.34 kilobases.
  • Gene annotation work revealed a total of 18,177 protein-coding genes in this genomic assembly, as identified on the Ensembl database.
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The "paradox of the great speciators" has puzzled evolutionary biologists for over half a century. A great speciator requires excellent dispersal propensity to explain its occurrence on multiple islands, but reduced dispersal ability to explain its high number of subspecies. A rapid reduction in dispersal ability is often invoked to solve this apparent paradox, but a proximate mechanism has not been identified yet.

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Environments are heterogeneous in space and time, and the permeability of landscape and climatic barriers to gene flow may change over time. When barriers are present, they may start populations down the path toward speciation, but if they become permeable before the process of speciation is complete, populations may once more merge. In Southern Africa, aridland biomes play a central role in structuring the organization of biodiversity.

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The monophyly of the raptorial Circus genus (harriers) has never been in question, but the specific status of many, often vulnerable island endemic, taxa remains uncertain. Here we utilise one mitochondrial and three nuclear loci from all currently recognised Circus taxa (species and subspecies) to infer a robust phylogeny, to estimate the divergence date and to reconstruct the biogeographic origins of the Circus group. Our phylogeny supports both the monophyly of Circus and polyphyly of the genus Accipiter.

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The recent, rapid radiation of Zosteropidae, coupled with their high levels of colonizing ability and phenotypic diversity, makes species delimitation within this family problematic. Given these problems, challenges to establish the mechanisms driving diversity and speciation within this group have arisen. Four morphologically distinct southern African Zosterops taxa, with a contentious taxonomic past, provide such a challenge.

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