Publications by authors named "Govindaraj P"

PGK1 (phosphoglycerate kinase-1) is required for ATP production in the body. Mutation in the PGK1 gene causes a rare, inherited metabolic disorder causing deficiency of enzyme PGK1, leading to hemolytic anemia, neurological symptoms, and muscle weakness. We generated induced pluripotent stem cells (iPSCs) from a patient carrying a PGK1 variant by isolating fibroblasts from skin punch biopsy and reprogramming using CytoTune iPS 2.

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Introduction: Combined oxidative phosphorylation (OXPHOS) deficiency 44 (COXPD44; MIM# 618855) is caused by biallelic pathogenic variants in FAS-activated serine-threonine kinase domain 2 (FASTKD2) (MIM# 612322). COXPD44 is characterized by variable clinical features-developmental delay, chronic epileptic encephalopathy, seizure disorder/status epilepticus and cerebellar ataxia. We ascertained one sib with episodic acute encephalomyopathy triggered by acute gastroenteritis and associated with haematological abnormalities, rhabdomyolysis leading to acute kidney injury, hypotensive shock leading to early death and a similarly affected sib with early death.

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Background: Neuronal ceroid lipofuscinosis (NCL) is a rare hereditary lysosomal storage disorder causing neuronal loss and progressive neurodegeneration. variants cause varied phenotypic presentations.

Case Report: A 49-year-old male presented with late adult-onset progressive focal right lower limb dystonia.

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The synthesis of magnesium hydroxide nanoparticles (Mg(OH) NPs) using plant extracts are known to be a practical, economical, and an environmentally friendly approach. In this work, Mg(OH) NPs were synthesized using aqueous leaf extract of Tinospora cordifolia, a medicinal plant commonly found in India. The synthesized Mg(OH) NPs were characterized using various spectroscopic techniques.

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The location of defect formed in the final composite is identified using sensor data. Herein, we report the development of an online process monitoring system for vacuum-assisted resin transfer molding (VARTM) process using large area graphene coated in-situ fabric sensor. Besides imparting excellent mechanical properties to the final composites, these sensors provide critical information during the composite processing including detecting defects and evaluating processing parameters.

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Article Synopsis
  • Tropical ataxic neuropathy (TAN) is a condition that involves problems with movement, vision, hearing, and has been linked to nutritional/toxic issues, but genetic factors may also play a role.
  • A study on 65 patients with TAN utilized various genetic and biochemical analyses to investigate potential mitochondrial dysfunction, finding signs of mitochondrial DNA abnormalities and reduced respiratory chain activity.
  • Results showed that TAN has a range of genetic abnormalities, suggesting it's not just caused by dietary toxins, which could help in understanding the disease's origins and development.
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  • Carbonic anhydrase 5A (CA5A) is a zinc enzyme that helps convert CO to bicarbonate and is linked to a rare metabolic disorder called Carbonic anhydrase 5A deficiency (CA5AD).
  • Mutations in CA5A can lead to severe symptoms like acute encephalopathy in infants, and CA5A has two similar pseudogenes that may complicate genetic testing.
  • The report discusses a case of CA5AD resulting from specific genetic variants in an infant, highlighting the importance of understanding pseudogenes in genetic analysis.
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  • The study investigates winter sprouting potential and red rot resistance in sugarcane hybrids, addressing the narrow genetic base of cultivated varieties in subtropical regions.
  • The research evaluated 15 genome-introgressed hybrids against five check varieties over three years for traits associated with winter sprouting and red rot resistance, with a focus on significant hybrids like GU 12-19, which showed the highest sprouting potential.
  • Findings included notable correlations between fiber content and other traits, with a principal component analysis revealing 57.6% of the total variation in characteristics, indicating the hybrids' promising performance in subtropical climates.
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Background: Energy canes are viable feedstocks for biomass industries due to their high biomass production potential, lower susceptibility to insects and diseases, better ability to adapt to extreme conditions and clean bioenergy. Interspecific hybrids (ISH) and intergeneric hybrids (IGH) have great potential to meet the growing demand of biomass, biomass-derived energy and feedstock.

Results: In this study, two types of energy canes, Type I and Type II, derived from S.

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Mitochondria are an indispensable part of the cell that plays a crucial role in regulating various signaling pathways, energy metabolism, cell differentiation, proliferation, and cell death. Since mitochondria have their own genetic material, they differ from their nuclear counterparts, and dysregulation is responsible for a broad spectrum of diseases. Mitochondrial dysfunction is associated with several disorders, including neuro-muscular disorders, cancer, and premature aging, among others.

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The fascinating characteristics of one-dimensional van der Waals crystals (V-VI-VII) enable their wide functionality. In particular, their anisotropic carrier transport and low thermal conductivity are advantageous from a thermoelectric viewpoint. In a quest for the "electron crystal phonon glass" paradigm, the present work investigated the thermoelectric performance of BiSBr.

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Alzheimer's disease (AD) is a neurodegenerative disease characterized by amyloid-beta (Aβ) aggregation, neuroinflammation, oxidative stress, and dysfunction in the mitochondria and cholinergic system. In this study, the synthesis of chitosan-polylactic acid-loaded magnesium oxide nanocomposite (CH/PLA/MgONCs) was examined using the green precipitation method. The synthesized CH/PLA/MgONCs were confirmed by using the UV-Vis spectrum, FT-IR, SEM-EDAX, and physical properties.

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Background: SH3TC2 variations lead to demyelinating recessive Charcot-Marie-Tooth (CMT) disease, which is commonly associated with early-onset scoliosis and cranial neuropathy. Data from Indian ethnicity is limited.

Objective: We aim to report the characteristics of patients with SH3TC2-associated neuropathy from an Indian cohort.

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Neuromuscular diseases (NMDs) affect ∼15 million people globally. In high income settings DNA-based diagnosis has transformed care pathways and led to gene-specific therapies. However, most affected families are in low-to-middle income countries (LMICs) with limited access to DNA-based diagnosis.

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Background: Chronic liver diseases (CLDs) encompass a group of conditions that are marked by diminished liver function due to ongoing inflammation or damage. This study aimed to establish a relationship between the red cell distribution width (RDW) and two scoring systems, namely the Model for End-Stage Liver Disease (MELD) score and Child-Turcotte-Pugh (CTP) score, in individuals diagnosed with CLDs.

Methods:  The study was carried out at Aarupadai Veedu Medical College & Hospital, Pondicherry, India, following approval from the Institutional Ethical Committee in the Department of General Medicine and Gastroenterology.

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Objectives: The long-term isolation, endogamy practices, and environmental adaptations have shaped the enormous human diversity in India. The genetic and morphological variations in mainland Indians are well studied. However, the data on the Indian Himalayan populations are scattered.

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Unlabelled: Lead (Pb), a ubiquitously present heavy metal toxin, has various detrimental effects on memory and cognition. However, the molecular processes affected by Pb causing structural and functional anomalies are still unclear. To explore this, we employed behavioral and proteomic approaches using rat pups exposed to lead acetate through maternal lactation from postnatal day 0 (P0) until weaning.

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Article Synopsis
  • Charcot-Marie-Tooth (CMT) disease is the most common inherited neuromuscular disorder, but there is limited data on its genetic causes in India; this study uses high throughput sequencing to explore genetic variations in an Indian CMT cohort.
  • The study involved 55 patients with suspected inherited neuropathy, revealing a wide range of clinical features and a variety of genetic variations, including novel ones and variants of uncertain significance.
  • A genetic diagnosis was achieved in 87% of patients, contributing valuable information to the understanding of CMT and paving the way for future validation studies in cell or animal models.
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The pressure induced structural, electronic, transport, and lattice dynamical properties of ZnGaTe were investigated with the combination of density functional theory, Boltzmann transport theory and a modified Debye-Callaway model. The structural transition from 4̄ to 4̄2 occurs at 12.09 GPa.

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  • Sugarcane is a key commercial crop for producing sugar, bioethanol, and other products, but traditional breeding methods are slow and expensive.
  • The study utilized association mapping to find quantitative trait loci (QTLs) and genes linked to sucrose and yield traits using a panel of 110 sugarcane genotypes and 148 microsatellite primers.
  • A total of 24 significant QTLs were discovered, with potential candidate genes identified that could enhance sugarcane breeding programs through advanced techniques like genome editing.
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Background: Local relapse of oral squamous cell carcinoma in non-involved mucosal surgical margins indicated possibility of field alteration in the margins, which could be predicted with certain biomarkers. The objectives were to evaluate the expression of Ki-67, Cornulin and ISG15 in non-involved mucosal surgical margins and the association of clinicopathological prognosticators with local relapse in oral squamous cell carcinoma.

Methods: Surgical margins from the study (relapse) group (n = 23), control (non-relapse) group (n = 32) and normal oral mucosa (n = 5) were immunohistochemically stained using Ki-67, Cornulin and ISG15 antibodies.

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Vanishing white matter disease (VWMD) due to mutations is a common leukodystrophy characterised by childhood onset, autosomal recessive inheritance, and progressive clinical course with episodic worsening. There are no reports of genetically confirmed adult patients from India. We describe the phenotype of two adults with genetically confirmed VWMD and typical radiological findings.

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Objective: Neurocognitive disabilities in Duchenne muscular dystrophy (DMD) children beginning in early childhood and distal DMD gene deletions involving disruption of Dp140 isoform are more likely to manifest significant neurocognitive impairments. MRI data analysis techniques like brain-network metrics can provide information on microstructural integrity and underlying pathophysiology.

Methods: A prospective study on 95 participants [DMD = 57, and healthy controls (HC) = 38].

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Mitochondrial disorders are often difficult to diagnose because of diverse clinical phenotypes. FGF-21 and GDF-15 are metabolic hormones and promising biomarkers for the diagnosis of these disorders. This study has systematically evaluated serum FGF-21 and GDF-15 levels by ELISA in a well-defined cohort of patients with definite mitochondrial disorders (n = 30), neuromuscular disease controls (n = 36) and healthy controls (n = 36) and aimed to ascertain their utility in the diagnosis of mitochondrial disorders.

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Whole exome sequencing (WES), analyzed with GENESIS and WeGET, revealed a homozygous deletion in the C1QBP gene in a patient with progressive external ophthalmoplegia (PEO) and multiple mtDNA deletions. The gene encodes the mitochondria-located complementary 1 Q subcomponent-binding protein, involved in mitochondrial homeostasis. Biallelic mutations in C1QBP cause mitochondrial cardiomyopathy and/or PEO with variable age of onset.

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