Publications by authors named "Goggins M"

Background: Researchers and participants who are members of minoritized populations experience negative psychosocial and wellness outcomes like burnout. Burnout may manifest uniquely for Black women in academia conducting research with Black women participants navigating similar sociocultural contexts.

Objectives: This article qualitatively interprets our experiences as 15 Black women scholar-practitioners at a midwestern university conducting community-engaged research.

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Objectives: Pancreatic ductal adenocarcinoma (PDAC) is a highly lethal disease that is challenging to detect at an early stage. Biomarkers are needed that can detect PDAC early in the course of disease when interventions lead to the best outcomes. We highlight study design and statistical considerations that inform pancreatic cancer early detection biomarker evaluation.

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Better models are needed to identify active drugs to treat pancreatic adenocarcinoma (PAC) patients. We used 3D hanging drop cultures to produce spheroids from five PAC cell lines and tested nine FDA-approved drugs in clinical use. All PAC cell lines in 2D culture were sensitive to three drugs (gemcitabine, docetaxel and nab-paclitaxel), however most PAC (4/5) 3D spheroids acquired profound chemoresistance even at 10 µM.

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  • The study investigates how AI models, specifically explainable boosting machines (EBMs), improve the management of pancreatic cysts by assessing risk levels for malignant transformation compared to standard clinical practices.
  • Two different EBM models were evaluated, with one incorporating clinical features and cyst fluid molecular markers (CFMM), based on a dataset of 850 cases.
  • Results showed that the models provided higher accuracy in guiding patient management decisions, such as monitoring and surgery, and could significantly reduce unnecessary surgeries and improve classification for discharge compared to traditional clinical approaches.
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  • Pancreatic ductal adenocarcinoma (PDAC) is a highly fatal cancer with most cases being diagnosed at an advanced stage, and there's no recommended population-wide screening despite some benefits from monitoring high-risk individuals.
  • This study aimed to compare survival rates of patients who detected their PDAC through surveillance with a national database, using data from the Cancer of the Pancreas Screening program and matched SEER patients.
  • Results showed that individuals in the screening group were diagnosed at an earlier stage with smaller tumor sizes compared to the control group, but overall survival benefits remain uncertain and require further investigation.
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  • - The study investigates how genetic variants affect the relationship between heavy alcohol consumption and the risk of pancreatic cancer, utilizing data from a sizable European ancestry population.
  • - Researchers identified a new relevant genomic region (10p11.22) linked to pancreatic cancer risk and a specific SNP (rs7898449) that suggests this association is influenced by heavy alcohol consumption.
  • - The findings highlight the potential role of the neuropilin 1 gene in pancreatic cancer development, offering new insights into cancer risk factors, especially among heavy drinkers.
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  • In the 1990s, there were no effective options for individuals at high risk of pancreatic cancer, despite advances in understanding genetic links to cancer.
  • Late 1990s saw the start of surveillance efforts for familial and hereditary pancreatic cancer, although the effectiveness of early detection was uncertain.
  • This special issue presents 18 expert articles aimed at refining surveillance strategies, demonstrating that improved surveillance can lead to better survival rates through early detection and management.
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  • - The study investigates the prevalence of inherited cancer susceptibility variants in patients with pancreatic cancer and nonpancreatic periampullary cancers, emphasizing that both groups show similar rates of these variants.
  • - A total of 608 patients were analyzed, revealing that 7.7% carried significant germline variants, with 89% linked to major cancer susceptibility genes and a notable majority having a family cancer history.
  • - The findings support the recommendation for germline susceptibility testing in all patients with periampullary cancers, not just those with pancreatic cancer.
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  • Pancreatic surveillance, which includes yearly endoscopic ultrasounds and MRI/MRCP, can identify early pancreatic cancer and improve long-term survival, but is limited to those with specific familial or genetic risk factors.
  • There is a need for more accurate, affordable, and safer biomarkers for early detection of pancreatic cancer, as current methods have not succeeded in finding them.
  • New strategies, like gene tests for personalized biomarker analysis and the use of artificial intelligence to manage complex biomarker data, show potential for developing clinically useful biomarkers for early pancreatic cancer detection.
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  • The study explores how levels of the carbohydrate antigen CA19-9 and a related glycan, DUPAN-2, can aid in diagnosing pancreatic cancer, particularly highlighting differences based on genetic variants in fucosyltransferase (FUT) enzymes.
  • It involved analyzing genetic data from 938 individuals to determine how these variants affect serum levels of DUPAN-2 and CA19-9, with findings suggesting improved diagnostic sensitivity for early-stage pancreatic cancer.
  • The conclusion emphasizes the potential of combining genetic testing with tumor markers to enhance diagnostic accuracy for pancreatic cancer, showing promising results when using a combination of FUT, CA19-9, and DUPAN-2 tests.
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Background & Aims: Genetic testing uptake for cancer susceptibility in family members of patients with cancer is suboptimal. Among relatives of patients with pancreatic ductal adenocarcinoma (PDAC), The GENetic Education, Risk Assessment, and TEsting (GENERATE) study evaluated 2 online genetic education/testing delivery models and their impact on patient-reported psychological outcomes.

Methods: Eligible participants had ≥1 first-degree relative with PDAC, or ≥1 first-/second-degree relative with PDAC with a known pathogenic germline variant in 1 of 13 PDAC predisposition genes.

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  • Cancer antigen 19-9 (CA19-9) is a key marker used to monitor pancreatic cancer but varies based on genetic factors from fucosyltransferase (FUT) variants, influencing its reference ranges in patients.
  • The study evaluated preoperative CA19-9 levels in 449 pancreatic cancer patients, analyzing how these levels and FUT variants correlate with survival outcomes.
  • Results indicated that higher CA19-9 levels were linked to worse outcomes in patients with higher FUT groups, while a variant-based CA19-9 test enhanced prediction of treatment response and recurrence after surgery.*
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We previously described an approach called RealSeqS to evaluate aneuploidy in plasma cell-free DNA through the amplification of ~350,000 repeated elements with a single primer. We hypothesized that an unbiased evaluation of the large amount of sequencing data obtained with RealSeqS might reveal other differences between plasma samples from patients with and without cancer. This hypothesis was tested through the development of a machine learning approach called Alu Profile Learning Using Sequencing (A-PLUS) and its application to 7615 samples from 5178 individuals, 2073 with solid cancer and the remainder without cancer.

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Objective: The aim of the study is to assess the relationship between magnetic resonance imaging (MRI)-based estimation of pancreatic fat and histology-based measurement of pancreatic composition.

Materials And Methods: In this retrospective study, MRI was used to noninvasively estimate pancreatic fat content in preoperative images from high-risk individuals and disease controls having normal pancreata. A deep learning algorithm was used to label 11 tissue components at micron resolution in subsequent pancreatectomy histology.

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  • The study investigates how regular use of proton pump inhibitors (PPIs) impacts the microbiomes of pancreatic and duodenal tissues, especially in relation to pancreatic cancer risk.
  • It analyzes microbiome profiles from 103 patients, revealing that PPI users have a significantly altered duodenal microbiome, with notable enrichment of Firmicutes and Streptococcus species.
  • The research highlights differences in microbiome diversity between the pancreas head and body/tail, finding that PPI use is linked to changes in both duodenal and pancreatic tissue microbiome profiles, although more pronounced effects were noted in the duodenum.
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  • - The NCCN Guidelines focus on identifying genetic variants that increase the risk of breast, ovarian, pancreatic, and prostate cancers, specifically targeting genes like BRCA1, BRCA2, and TP53.
  • - The updated guidelines now include a section addressing the needs of transgender, nonbinary, and gender diverse individuals regarding cancer risk reduction strategies.
  • - New criteria for testing and managing TP53 pathogenic variants and related risks of Li-Fraumeni syndrome have also been incorporated into the recommendations.
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Identifying the cells from which cancers arise is critical for understanding the molecular underpinnings of tumor evolution. To determine whether stem/progenitor cells can serve as cells of origin, we created a Msi2-Cre knock-in mouse. When crossed to CAG-LSL-Myc mice, Msi2-Cre mice developed multiple pancreatic cancer subtypes: ductal, acinar, adenosquamous, and rare anaplastic tumors.

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  • * The LINE-1 ORF1p protein is overexpressed in various cancers and has negligible expression in normal tissues, indicating its potential as a highly specific blood-based cancer biomarker.
  • * Advanced digital immunoassays can detect low levels of ORF1p in plasma, showing promise for early detection of ovarian cancer and monitoring treatment responses in gastroesophageal cancers, suggesting it could be a valuable tool for cancer diagnosis and prognosis.
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Objective: To quantify the rate of low-yield surgery, defined as no high-grade dysplastic precursor lesions or T1N0M0 pancreatic cancer at pathology, during pancreatic cancer surveillance.

Background: Global efforts have been made in pancreatic cancer surveillance to anticipate the diagnosis of pancreatic cancer at an early stage and improve survival in high-risk individuals (HRIs) with a hereditary predisposition. The negative impact of pancreatic cancer surveillance when surgery is performed for low-grade dysplasia or a non-neoplastic condition is not well quantified.

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Purpose: CA19-9 synthesis is influenced by common variants in the fucosyltransferase (FUT) enzymes FUT3 and FUT2. We developed a clinical test to detect FUT variants, and evaluated its diagnostic performance for pancreatic ductal adenocarcinoma (PDAC).

Experimental Design: A representative set of controls from the Cancer of the Pancreas Screening study was identified for each FUT functional group.

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Structuring jobs into occupations is the first step for analysis tasks in many fields of research, including economics and public health, as well as for practical applications like matching job seekers to available jobs. We present a data resource, derived with natural language processing techniques from over 42 million unstructured job postings in the National Labor Exchange, that empirically models the associations between occupation codes (estimated initially by the Standardized Occupation Coding for Computer-assisted Epidemiological Research method), skill keywords, job titles, and full-text job descriptions in the United States during the years 2019 and 2021. We model the probability that a job title is associated with an occupation code and that a job description is associated with skill keywords and occupation codes.

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  • * Researchers analyzed DNA from invasive pancreatic adenocarcinomas and precursor lesions of patients with and without ATM genetic variants to assess how these alterations contribute to cancer development.
  • * Findings revealed that somatic ATM alterations were present in a significant majority of invasive cancers (75%) but were much less common in precursor lesions (7.1%), suggesting that alterations may occur later in the progression of pancreatic cancer.*
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Introduction: Most patients with pancreatic cancer present with advanced stage, incurable disease. However, patients with high-grade precancerous lesions and many patients with low-stage disease can be cured with surgery, suggesting that early detection has the potential to improve survival. While serum CA19.

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