Publications by authors named "Ghadi S Al Hajj"

Data simulation is fundamental for machine learning and causal inference, as it allows exploration of scenarios and assessment of methods in settings with full control of ground truth. Directed acyclic graphs (DAGs) are well established for encoding the dependence structure over a collection of variables in both inference and simulation settings. However, while modern machine learning is applied to data of an increasingly complex nature, DAG-based simulation frameworks are still confined to settings with relatively simple variable types and functional forms.

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Article Synopsis
  • AIRR (Adaptive Immune Receptor Repertoires) are crucial for tracking immune responses, making them important in biomedical research.
  • Machine learning (ML) is useful for analyzing complex patterns in AIRR, but issues like reproducibility and transparency have slowed its adoption.
  • immuneML is a new open-source tool that simplifies the AIRR ML process and includes user-friendly interfaces, extensive documentation, and demonstrates its effectiveness through various applications in immune state prediction and antigen specificity.
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