What happens at the ionic-liquid (IL)/water interface when the Eu cation is complexed and extracted by bis(dimethyltriazinyl) pyridine "BTP" ligands has been investigated by molecular dynamics and potential of mean force simulations on the interface crossing by key species: neutral BTP, its protonated BTPH form, Eu, and the Eu(BTP) complex. At both the [BMI][TfN]/water and [OMI][TfN]/water interfaces, neither BTP nor Eu(BTP) are found to adsorb. The distribution of Eu(BTP) and Eu(BTP) precursors of Eu(BTP), and of their nitrate adducts, implies the occurrence of a stepwise complexation process in the interfacial domain, however.
View Article and Find Full Text PDFThe formation of aqueous biphasic systems (ABSs) based on aqueous ionic liquid (IL)/salt mixtures has been investigated via molecular dynamics simulations (with IL butyl-methyl-imidazolium triflate; salts NaCl, CsCl, SrCl, and EuCl). The analysis of ion distributions, solvation, and mutual interactions during the dynamics reveals the heterogeneity of all solutions due to ion segregation into mutually exclusive IL and salt domains, even in monophasic solutions ("ionic sociology"). Ion segregation and ABS formation are found to increase with (i) the salt content and (ii) the IL content, (iii) in the order Na < Sr < Eu, and (iv) when the IL ion "polarity" is diminished, following experimental trends.
View Article and Find Full Text PDFThe mechanism by which Zr-substituted and other transition metal-substituted polyoxometalates (POMs) form covalently linked dimers has been analyzed by means of static density functional theory (DFT) calculations with a continuous solvent model as well as Car-Parrinello molecular dynamics (CPMD) simulations with explicit solvent molecules. The study includes different stages of the process: the formation of the active species by alkalination of the solution and formation of intercluster linkages. CPMD simulations show that the Zr-triaqua precursor, [WOZr(HO)], under basic conditions, reacts with hydroxide anions to form Zr-aqua-hydroxo active species, [WOZr(OH)(HO)].
View Article and Find Full Text PDFPurely organic radical ions dimerize in solution at low temperature, forming long, multicenter bonds, despite the metastability of the isolated dimers. Here, we present the first computational study of these π-dimers in solution, with explicit consideration of solvent molecules and finite temperature effects. By means of force-field and ab initio molecular dynamics and free energy simulations, the structure and stability of π-[TCNE] (TCNE=tetracyanoethylene) dimers in dichloromethane have been evaluated.
View Article and Find Full Text PDFWe report DFT static and dynamic studies on uranyl complexes [UO(2)(NO(3))x(H(2)O)(y)L(z)](2-x) involved in the uranyl extraction from water to an "oil" phase (hexane) by an amide ligand L (N,N-dimethylacetamide). Static DFT results "in solution" (continuum SMD models for water and hexane) predict that the stepwise formation of [UO(2)(NO(3))(2)L(2)] from the UO(2)(H(2)O)(5)(2+) species is energetically favourable, and allow us to compare cis/trans isomers of penta- and hexa-coordinated complexes and key intermediates in the two solvents. DFT-MD simulations of [UO(2)(NO(3))(2)L(2)], [UO(2)(NO(3))(2)(H(2)O)L(2)], and [UO(2)(NO(3))(H(2)O)L(2)](+) species in explicit solvent environments (water, hexane, or the water/hexane interface) represented at the MM or full-DFT level reveal a versatile solvent dependent binding mode of nitrates, also evidenced by metadynamics simulations.
View Article and Find Full Text PDFQuantum chemical calculations are used to derive distributed polarizability models sufficiently accurate and compact to be used in classical molecular dynamics simulations of imidazolium-based room temperature ionic liquids. Two distributed polarizability models are fitted to reproduce the induction energy of three imidazolium cations (1,3-dimethyl-, 1-ethyl-3-methyl-, and 1-butyl-3-methylimidazolium) and four anions (tetrafluoroborate, hexafluorophosphate, nitrate, and thiocyanate) polarized by a point charge located successively on a grid of surrounding points. The first model includes charge-flow polarizabilities between first-neighbor atoms and isotropic dipolar polarizability on all atoms (except H), while the second model includes anisotropic dipolar polarizabilities on all atoms (except H).
View Article and Find Full Text PDFInorg Chem
January 2014
Static density functional theory (DFT) calculations with a continuous solvent model as well as classical and Car-Parrinello molecular dynamics (MD) simulations with explicit solvent molecules were performed to study the nature of Zr-monosubstituted monomeric and dimeric polyoxometalates (POMs) in water at different pHs. We have analyzed Zr-aqua, -hydroxo, and -aqua-hydroxo species derived from Linqvist- and Keggin-type anions. Both DFT and Car-Parrinello MD methods suggest that the Zr center tends to have coordination number greater than 6 and can bind up to 3 water molecules.
View Article and Find Full Text PDFStatic ab initio and density-functional computations, as well as Car-Parrinello molecular dynamics simulations in aqueous solution are reported for [UO2(OH)(κ(2)-O2)(H2O)2](-) and [UO2(OH)2(κ(1)-O2H)(H2O)](-). Whereas the κ(1)-hydroperoxo isomer is found to be more stable than the κ(2)-peroxo form in the gas phase, the order of stability is reversed in explicit bulk solution. Based on free energies from thermodynamic integration (BLYP functional), the peroxo form is favoured by ca.
View Article and Find Full Text PDFCar-Parrinello molecular dynamics (CMPD) simulations and static computations are reported at the BLYP level of density functional theory (DFT) for mixed [LaCl(x)(H(2)O)(y)(MeCN)(z)](3-x) complexes in aqueous and nonaqueous solution (acetonitrile). Both methodologies predict coordination numbers (i.e.
View Article and Find Full Text PDFWe report a molecular dynamics study on the EuBr(n)(3-n) complexes (n=0 to 6) formed upon complexation of Br(-) by Eu(3+) in the [BMI][PF(6)], [BMI][Tf(2)N] and [MeBu(3)N][Tf(2)N] ionic liquids (ILs), to compare the effect of the IL anion (PF(6)(-) versus Tf(2)N(-)), the IL cation (BMI(+) versus MeBu(3)N(+)) and the "IL humidity" on their solvation and stability. In "dry" solutions all complexes remain stable and the first coordination shell of Eu(3+) is purely anionic (Br(-) and IL anions), surrounded by IL cations (BMI(+) or MeBu(3)N(+) ions). Long range "onion type" solvation features (up to 20 Å from Eu(3+)), with alternating cation-rich and anion-rich solvent shells, are observed around the different complexes.
View Article and Find Full Text PDFThe complexation of perrhenate (ReO(4)(-)) anions by the uranyl (UO(2)(2+)) cation has been investigated by joint molecular dynamics simulations and spectroscopic (UV-vis, TRLFS, and EXAFS) studies in aqueous solution, acetonitrile, and three ionic liquids (ILs), namely, [Bmi][Tf(2)N], [Me(3)BuN][Tf(2)N], and [Bu(3)MeN][Tf(2)N] that are based on the same Tf(2)N(-) anion (bis(trifluoromethylsulfonyl)imide) and either Bmi(+) (1-butyl,3-methylimidazolium), Me(3)BuN(+), or Bu(3)MeN(+) cations. They show that ReO(4)(-) behaves as a weak ligand in aqueous solution and as a strong ligand in acetonitrile and in the ILs. According to MD simulations in aqueous solution, the UO(2)(ReO(4))(2) complex quickly dissociates to form UO(2)(H(2)O)(5)(2+), while in acetonitrile, a stable UO(2)(ReO(4))(5)(3-) species forms from dissociated ions.
View Article and Find Full Text PDFOptimizations at the BLYP and B3LYP levels are reported for the mixed uranyl chloro/water/acetonitrile complexes [UO(2)Cl(n)(H(2)O)(x)(MeCN)(5-n-x)](2-n) (n = 1-3) and [UO(2)Cl(n)(H(2)O)(x)(MeCN)(4-n-x)](2-n) (n = 2-4), in both the gas phase and a polarizable continuum modeling acetonitrile. Car-Parrinello molecular dynamics (CPMD) simulations have been performed for [UO(2)Cl(2)(H(2)O)(MeCN)(2)] in the gas phase and in a periodic box of liquid acetonitrile. According to population analyses and dipole moments evaluated from maximally localized Wannier function centers, uranium is less Lewis acidic in the neutral UO(2)Cl(2) than in the UO(2)(2+) moiety.
View Article and Find Full Text PDFFirst-principles and purely classical molecular dynamics (MD) simulations for complexes of the uranyl ion (UO(2)(2+)) are reviewed. Validation of Car-Parrinello MD simulations for small uranyl complexes in aqueous solution is discussed. Special attention is called to the mechanism of ligand-exchange reactions at the uranyl centre and to effects of solvation and hydration on coordination and structural properties.
View Article and Find Full Text PDFWe report a molecular dynamics study on pertechnetic acid (PTA) extraction from water to an oil phase containing either pure TBP (tri-n-butyl phosphate) or a TBP/n-hexane mixture, with the main aim to understand the state of the acid (associated TcO(4)H vs dissociated TcO(4)(-)H(+)) and its "complexation" by TBP. Experimentally, Tc(VII) is extracted from acidic water to TBP:alkane solutions in 1:3 or 1:4 Tc:TBP ratio, suggesting that three or four TBPs coordinate to TcO(4)H or TcO(4)(-). According to simulations in TBP solution, however, neither TcO(4)H nor TcO(4)(-) species displays specific coordination to TBP.
View Article and Find Full Text PDFOptimizations at the BLYP and B3LYP levels are reported for mixed uranyl-water/acetonitrile complexes [UO(2)(H(2)O)(5-n)(MeCN)(n)](2+) (n = 0-5), in both the gas phase and a polarizable continuum modeling acetonitrile. Car-Parrinello molecular dynamics (CPMD) simulations have been performed for these complexes in the gas phase, and for selected species (n = 0, 1, 3, 5) in a periodic box of liquid acetonitrile. According to structural and energetic data, uranyl has a higher affinity for acetonitrile than for water in the gas phase, in keeping with the higher dipole moment and polarizability of acetonitrile.
View Article and Find Full Text PDFNorbadione A (NBA) is a pigment present in edible mushrooms which is presumed to selectively complex Cs(+) cations. Due to a very uncommon complexation mechanism, we used a combination of several experimental techniques, including (1)H-NMR, (133)Cs-NMR, isothermal calorimetric, potentiometric titrations and molecular dynamics MD simulations to determine the nature of the complexed species, as well as their stability constants for the NBA-M(+) systems (M(+) = Cs(+), K(+), Na(+)) in methanol:water 80:20 solutions at 25.0 degrees C.
View Article and Find Full Text PDFThe inclusion of NH(4)(+) as counterions in Car-Parrinello molecular dynamics (CPMD) simulations of anionic uranyl(VI) complexes is proposed as a viable approach to modeling "real" aqueous solutions. For [UO(2)F(4)(H(2)O)](2-) in water, it is shown that the inclusion of two NH(4)(+) ions strengthens the bond between uranyl and the water ligand by ca. 2 kcal/mol, improving the accordance with experiment.
View Article and Find Full Text PDFAqueous solutions of the polyoxometallate alpha-PW(12)O(40)(3-) Keggin anion "PW(3-)" have been simulated by molecular dynamics, comparing two anion concentrations (0.06 and ca. 0.
View Article and Find Full Text PDFJ Phys Chem B
September 2008
The stepwise addition of 1 to 4 Cl(-) anions to the uranyl cation has been studied via potential of mean force (PMF) calculations in the [BMI][Tf 2N] ionic liquid based on the 1-butyl-3-methylimidazolium cation (BMI(+)) and the bis(trifluoromethylsulfonyl)imide anion (Tf2N(-)). According to these calculations, the four Cl(-) complexation reactions are favored and UO2Cl4(2-) is the most stable chloride complex in [BMI][Tf2N]. The solvation of the different chloro-complexes is found to evolve from purely anionic (ca.
View Article and Find Full Text PDFMixed uranyl aquo chloro complexes of the type [UO2(H2O)xCly]2-y (y = 1, 2, 3, 4; x + y = 4, 5) have been optimized at the BLYP, BP86, and B3LYP levels of density functional theory in vacuo and in a polarizable continuum modeling bulk water (PCM) and have been studied at the BLYP level with Car-Parrinello molecular dynamics (MD) simulations in the gas phase and in explicit aqueous solution. Free binding energies were evaluated from static PCM data and from pointwise thermodynamic integration involving constrained MD simulations in water. The computations reveal significant solvent effects on geometric and energetic parameters.
View Article and Find Full Text PDFWe report a molecular dynamics (MD) study of the effect of a fluorinated lipophilic alcohol (referred to as "cs3" by Delmau et al, Solvent Extr. Ion Exch., 2005, 23, 23) used as a phase modifier in the solvent extraction of Cs(+) NO(3)(-) by a calix[4]arene.
View Article and Find Full Text PDFWe report molecular dynamics studies on the solvation of sodium chloride in the 1-butyl-3-methyl-imidazolium bis(trifluoromethylsulfonyl)imide ionic liquid ([BMI][Tf2N] IL). We first consider the potential of mean force for dissociating a single Na+Cl- ion pair, showing that the latter prefers to be undissociated rather than dissociated (by ca. 9 kcal/mol), with a free energy barrier of ca.
View Article and Find Full Text PDFAccording to Car-Parrinello molecular dynamics simulations for [UO(2)(NO(3))(3)](-), [UO(2)(NO(3))(4)](2-), and [UO(2)(OH(2))(4-)(NO(3))](+) complexes in the gas phase and in aqueous solution, the nitrate coordination mode to uranyl depends on the interplay between ligand-metal attractions, interligand repulsions, and solvation. In the trinitrate, the eta(2)-coordination is clearly favored in water and in the gas phase, leading to a coordination number (CN) of 6. According to pointwise thermodynamic integration involving constrained molecular dynamics simulations, a change in free energy of +6 kcal/mol is predicted for eta(2)- to eta(1)-transition of one of the three nitrate ligands in the gas phase.
View Article and Find Full Text PDFWe report a molecular dynamics study of the solvation of UCl(6)(-), UCl(6)(2-), and UCl(6)(3-) complexes in the [BMI][Tf(2)N] and [MeBu(3)N][Tf(2)N] ionic liquid cations based on the same anion (bis(trifluoromethylsulfonyl)imide (Tf(2)N-)) and the butyl-3-methyl-imidazolium+ (BMI+) or methyl-tri-n-butyl-ammonium (MeBu(3)N+) cation, respectively. The comparison of two electrostatic models of the complexes (ionic model with -1 charged halides versus quantum mechanically derived charges) yields similar solvation features of a given solute. In the two liquids, the first solvation shell of the complexes is positively charged and evolves from purely cationic in the case of UCl(6)(3-) to a mixture of cations and anions in the case of UCl(6)(-).
View Article and Find Full Text PDFWe report a molecular dynamics study of biphasic systems involved in the rhodium-catalyzed hydroformylation of 1-hexene in the 1-butyl-3-methyl-imidazolium hexafluorophosphate ionic liquid ([BMI][PF(6)] IL). We first describe the neat [BMI][PF(6)] interfaces with hexene (the substrate) and heptanal (the linear reaction product) as organic phases. The former interface is molecularly sharp with BMI+ cations preferentially oriented "perpendicular" (i.
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