Impact of Plant-Microbe Interactions with a Focus on Poorly Investigated Urban Ecosystems-A Review.

The urbanization process, which began with the Industrial Revolution, has undergone a considerable increase over the past few decades. Urbanization strongly affects ecological processes, often deleteriously, because it is associated with a decrease in green spaces (areas of land covered by vegetation), loss of natural habitats, increased rates of species extinction, a greater prevalence of invasive and exotic species, and anthropogenic pollutant accumulation. In urban environments, green spaces play a key role by providing many ecological benefits and contributing to human psychophysical well-being.

The adaptability of and the sensitivity of to semi-arid steppe is reflected in the stem and root vascular cambium and anatomical wood traits.

Afforestation success is measured by the tree establishment and growth capacity which contribute to a range of ecosystem services. In the Mongolian steppe, and have been tested as candidate species for large afforestation programs, by analyzing their response to a combination of irrigation and fertilization treatments. While in temperate and Mediterranean forest ecosystems, xylogenetic studies provide insight into the trees' plasticity and adaptability, this type of knowledge is non-existent in semi-arid regions, whose climatic features are expected to become a global issue.

Importance of Application Rates of Compost and Biochar on Soil Metal(Loid) Immobilization and Plant Growth.

In this study, we investigated the effect of different rates of compost (20%, 40%, 60% /) in combination with biochar (0%, 2%, 6% /) on soil physiochemical properties and the mobility of arsenic (As) and lead (Pb), in addition to the ability of (ecotype Columbia-0) to grow and accumulate metal(loid)s. All modalities improved pH and electrical conductivity, stabilized Pb and mobilized As, but only the mixture of 20% compost and 6% biochar improved plant growth. Plants in all modalities showed a significant reduction in root and shoot Pb concentrations compared to the non-amended technosol.

Key Pathways and Genes of and Roots under Cadmium Stress Responses: Differences and Similarities.

Cadmium (Cd) is among the world's major health concerns, as it renders soils unsuitable and unsafe for food and feed production. Phytoremediation has the potential to remediate Cd-polluted soils, but efforts are still needed to develop a deep understanding of the processes underlying it. In this study, we performed a comprehensive analysis of the root response to Cd stress in , which can phytostabilize Cd, and in , which is a Cd hyperaccumulator.

The Course of Mechanical Stress: Types, Perception, and Plant Response.

Mechanical stimuli, together with the corresponding plant perception mechanisms and the finely tuned thigmomorphogenetic response, has been of scientific and practical interest since the mid-17th century. As an emerging field, there are many challenges in the research of mechanical stress. Indeed, studies on different plant species (annual/perennial) and plant organs (stem/root) using different approaches (field, wet lab, and in silico/computational) have delivered insufficient findings that frequently impede the practical application of the acquired knowledge.

A Multi-Level Approach as a Powerful Tool to Identify and Characterize Some Italian Autochthonous Common Bean ( L.) Landraces under a Changing Environment.

A prime role in matters of agrobiodiversity is held by landraces, which serve as a repository gene pool able to meet sustainable development goals and to face the ongoing challenges of climate change. However, many landraces are currently endangered due to environmental and socio-economic changes. Thus, effective characterization activities and conservation strategies should be undertaken to prevent their genetic and cultural erosion.

Network-Based Analysis to Identify Hub Genes Involved in Spatial Root Response to Mechanical Constrains.

Previous studies report that the asymmetric response, observed along the main poplar woody bent root axis, was strongly related to both the type of mechanical forces (compression or tension) and the intensity of force displacement. Despite a large number of targets that have been proposed to trigger this asymmetry, an understanding of the comprehensive and synergistic effect of the antistress spatially related pathways is still lacking. Recent progress in the bioinformatics area has the potential to fill these gaps through the use of in silico studies, able to investigate biological functions and pathway overlaps, and to identify promising targets in plant responses.

Root and shoot biology of Arabidopsis halleri dissected by WGCNA: an insight into the organ pivotal pathways and genes of an hyperaccumulator.

Arabidopsis halleri is a hyperaccumulating pseudo-metallophyte and an emerging model to explore molecular basis of metal tolerance and hyperaccumulation. In this regard, understanding of interacting genes can be a crucial aspect as these interactions regulate several biological functions at molecular level in response to multiple signals. In this current study, we applied a weighted gene co-expression network analysis (WGCNA) on root and shoot RNA-seq data of A.

Photoreceptors' gene expression of Arabidopsis thaliana grown with biophilic LED-sourced lighting systems.

Using specific photoreceptors, plants can sense light signals fundamental to their growth and development under changing light conditions. Phytochromes sense red and far-red light, cryptochromes and phototropins sense UV-A and blue light, while the UVR8 gene senses UV-B signals. The study of the molecular mechanisms used by plants to respond to artificial biophilic lighting is of pivotal importance for the implementation of biophilic approaches in indoor environments.

Identification of Known and Novel L. MicroRNAs and Their Targets Using High-Throughput Sequencing and Degradome Analysis.

MicroRNAs (miRNAs) are a class of non-coding molecules involved in the regulation of a variety of biological processes. They have been identified and characterized in several plant species, but only limited data are available for L., one of the most promising bioenergy crops.

Morpho-Physiological Responses of L. to the LED-Sourced CoeLux System.

The CoeLux lighting system reproduces the true effect of natural sunlight entering through an opening in the ceiling, with a realistic sun perceived at an infinite distance surrounded by a clear blue sky. It has already been demonstrated that this new lighting system generates long-term positive effects on human beings; however, there are no investigations so far concerning the plant responses to CoeLux lighting. To fill this gap, the model plant L.

Root Biomass Distribution of and Afforestation Stands Is Affected by Watering Regimes and Fertilization in the Mongolian Semi-arid Steppe.

Desertification of the semi-arid steppe of Mongolia is advancing very rapidly, motivating afforestation efforts. The "Green Belt" joint project (Government of Mongolia and Republic of Korea), which aims to mitigate soil degradation and develop agroforestry activities through the planting of a forest shelterbelt, is one such response. In these plantations, tree growth has been supported by different watering regimes (no watering, 2, 4, and 8 L h) and by two types of soil fertilization (NPK and Compost).

The rhizosphere of Salix viminalis plants after a phytostabilization process assisted by biochar, compost, and iron grit: chemical and (micro)-biological analyses.

Amendments, such as biochar, compost, and iron grit, used in phytostabilization studies, showed positive effects on soil physico-chemical properties, plant growth, and the microbial community. However, assisted phytostabilization studies do not always focus on the rhizosphere area where soil, plants, and microorganisms are affected by the amendments and plants and microorganisms can also interact with each other. The aims of this study were to evaluate the effects of amendment application on the exudation of organic acids by Salix viminalis plant roots, as well as the effects of amendments and plant development on the soil CHNS contents and the microbial community activity and diversity, assessed by measuring enzyme activities and using Biolog EcoPlates tests and next-generation sequencing analyses.

WOX genes expression during the formation of new lateral roots from secondary structures in Populus nigra (L.) taproot.

Despite the large amounts of data available on lateral root formation, little is known about their initiation from secondary structures. In the present work, we applied a bending treatment to Populus nigra (L.) woody taproots to induce the formation of new lateral roots.

Evaluation of direct and biochar carrier-based inoculation of Bacillus sp. on As- and Pb-contaminated technosol: effect on metal(loid) availability, Salix viminalis growth, and soil microbial diversity/activity.

Phytomanagement manipulates the soil-plant system to lower the risk posed by contaminated soils. In this process, the addition of amendments, such as biochar, and bacteria can improve the fertility of poor contaminated soils and consequently ameliorate plant growth. A number of studies based on the inoculation of soil with microorganisms of the genus Bacillus, previously isolated from contaminated sites, revealed positive effects on soil properties and plant growth.

Application of amendments for the phytoremediation of a former mine technosol by endemic pioneer species: alder and birch seedlings.

Metal(loid) pollution of soils has important negative effects on the environment and human health. For the rehabilitation of these soils, some eco-innovative strategies, such as phytoremediation, could be chosen. This practice could establish a plant cover to reduce the toxicity of the pollutants and stabilize the soil, preventing soil erosion and water leaching; this technique is called phytoremediation.

Effect of biochar and redmud amendment combinations on Salix triandra growth, metal(loid) accumulation and oxidative stress response.

Remediation of metal(loid) polluted soils is an important area of research nowadays. In particular, one remediation technique is much studied, phytomanagement. Phytomanagement combines amendment application and plant growth in order to reduce the risk posed by contaminants.

Formation of Annual Ring Eccentricity in Coarse Roots within the Root Cage of Growing on Slopes.

The coarse roots of included in the cage are the ones most involved in tree stability. This study explored the variations in traits, such as volume, cross-sectional area, and radius length of cage roots, and used those data to develop a mathematical model to better understand the type of forces occurring for each shallow lateral root segment belonging to different quadrants of the three-dimensional (3D) root system architecture. The pattern and intensity of these forces were modelled along the root segment from the branching point to the cage edge.

Assisted phytoremediation of a former mine soil using biochar and iron sulphate: Effects on As soil immobilization and accumulation in three Salicaceae species.

Metal(loid) accumulation in soils, is of increasing concern because of the potential human health risks. Therefore, metal(loid) contaminated sites need rehabilitation. It is becoming increasingly popular to use phytoremediation methods for the reclamation of sites containing metal(loid)s.

Amending an As/Pb contaminated soil with biochar, compost and iron grit: effect on Salix viminalis growth, root proteome profiles and metal(loid) accumulation indexes.

There is currently a large amount of research being done into the phytoremediation of polluted soils. Plant installation in contaminated soils may require the application of soil amendments, such as biochar, compost and/or iron grit, which can improve the soil conditions and reduce the metal (loid) phytoavailability and mobility. The beneficial effects of these amendments on soil properties, plant growth and metal (loid) accumulation ability have already been described, although their effect on the plants response machinery has been poorly studied.

Effect of different tissue biochar amendments on As and Pb stabilization and phytoavailability in a contaminated mine technosol.

Phytomanagement of metal(loid) contaminated soils is an important study of research nowadays. However, such process often requires the application of amendments, i.e.