Publications by authors named "Frederique Eber"

Meiotic recombination is a key biological process in plant evolution and breeding, as it generates genetic diversity in each generation through the formation of crossovers (COs). However, due to their importance in genome stability, COs are highly regulated in frequency and distribution. We previously demonstrated that this strict regulation of COs can be modified, both in terms of CO frequency and distribution, in allotriploid Brassica hybrids (2n = 3x = 29; AAC) resulting from a cross between Brassica napus (2n = 4x = 38; AACC) and Brassica rapa (2n = 2x = 20; AA).

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  • Meiosis drives genetic diversity in sexual organisms, but recombination is tightly regulated, mostly occurring in areas with low DNA methylation.
  • Researchers studied two Brassica napus hybrids to identify large regions lacking recombination and explored the role of DNA methylation and structural variations in this absence.
  • Findings suggest that hypermethylated or inverted regions can hinder recombination and may affect important agronomic traits, highlighting the need for breeders to consider these factors when combining beneficial alleles in crop varieties.
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Meiotic recombination is the main tool used by breeders to generate biodiversity, allowing genetic reshuffling at each generation. It enables the accumulation of favorable alleles while purging deleterious mutations. However, this mechanism is highly regulated with the formation of one to rarely more than three crossovers, which are not randomly distributed.

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  • * Researchers used the Brassica species to replicate the development of a new allopolyploid by creating and selecting euploid variants over eight generations through various genetic backgrounds and polyploid formation methods.
  • * The study found that after recurrent selection, the occurrence of aneuploid offspring significantly decreased, improving genome stability and fertility, while also revealing how genetic background and cytoplasmic origin influenced the outcomes.
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  • The text mentions a correction to a previously published article with the DOI 10.3389/fpls.2018.00368.
  • The correction likely addresses errors or inaccuracies in the original paper.
  • This emphasizes the importance of accuracy and transparency in academic publishing.
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Meiotic crossovers (COs) are essential for proper chromosome segregation and the reshuffling of alleles during meiosis. In WT plants, the number of COs is usually small, which limits the genetic variation that can be captured by plant breeding programs. Part of this limitation is imposed by proteins like FANCM, the inactivation of which results in a 3-fold increase in COs in .

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  • * Researchers created advanced hybrids by cross-pollinating oilseed rape with wild radish and analyzed the genomic integration of oilseed rape regions in the hybrids over generations.
  • * Results showed that certain genomic regions of oilseed rape are more susceptible to being incorporated into the wild radish’s genome and this gene transfer could affect plant traits like height and seed production, suggesting that transgene insertion should consider gene stability to prevent unwanted gene flow.
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  • Meiotic recombination through crossovers (COs) is crucial for genetic diversity, but typically occurs in a limited and uneven manner on chromosomes.
  • Research indicates that using allotriploid hybrids from Brassica species can disrupt these patterns, leading to a significant increase in COs—1.7 to 3.4 times more than in diploids.
  • This increase results in altered recombination landscapes and decreased CO interference, particularly noticeable in male allotriploid hybrids, which could greatly benefit geneticists and plant breeders by enhancing genetic diversity in Brassica species.
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Allopolyploidy, which results from the merger and duplication of two divergent genomes, has played a major role in the evolution and diversification of flowering plants. The genomic changes that occur in resynthesized or natural neopolyploids have been extensively studied, but little is known about the effects of the reproductive mode in the initial generations that may precede its successful establishment. To truly reflect the early generations of a nascent polyploid, two resynthesized allotetraploid populations were obtained for the first time by open pollination.

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  • Allopolyploid species' genomes change over time, but the long-term effects on the relationship between the original genomes are still unclear.
  • The study extracted the diploid AA component from Brassica napus, showing that only one method was successful and the resulting plants had less of the expected A subgenome.
  • The research suggests that during coevolution over about 7,500 years, subgenome interdependency can arise due to structural changes, with some gene losses compensated by genes from related species.
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Meiotic recombination is the fundamental process that produces balanced gametes and generates diversity within species. For successful meiosis, crossovers must form between homologous chromosomes. This condition is more difficult to fulfill in allopolyploid species, which have more than two sets of related chromosomes (homoeologs).

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  • The production of allohexaploid Brassica (2n = AABBCC) has potential benefits for plant breeders, offering hybrid vigor and diverse genetic contributions from various Brassica genomes.
  • High-throughput molecular techniques were employed to analyze a population of allohexaploid candidates, revealing that while allelic segregation generally adhered to Mendelian principles, there was no strong preference for complete 2n = AABBCC chromosome sets.
  • Findings indicate that while there is potential for stable allohexaploid lines, effective selection for the desired chromosome configuration is crucial due to observed karyotype distortions in progeny.
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  • Recombination is crucial for genetic diversity, and this study examines how the presence of C chromosomes affects crossover rates in Brassica napus hybrids.
  • It was found that increasing the number of C chromosomes in hybrids led to significantly higher homologous recombination rates, with certain configurations, specifically C6 and C9, showing the greatest increases.
  • The study reveals that different arrangements of chromosomes can influence genetic recombination, suggesting new strategies for enhancing genetic diversity in breeding programs.
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Phytopathogenic fungi frequently contain dispensable chromosomes, some of which contribute to host range or pathogenicity. In Leptosphaeria maculans, the stem canker agent of oilseed rape (Brassica napus), the minichromosome was previously suggested to be dispensable, without evidence for any role in pathogenicity. Using genetic and genomic approaches, we investigated the inheritance and molecular determinant of an L.

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The role played by whole-genome duplication (WGD) in evolution and adaptation is particularly well illustrated in allopolyploids, where WGD is concomitant with interspecific hybridization. This 'Genome Shock', usually accompanied by structural and functional modifications, has been associated with the activation of transposable elements (TEs). However, the impact of allopolyploidy on TEs has been studied in only a few polyploid species, and not in Brassica, which has been marked by recurrent polyploidy events.

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Chromosome rearrangements are common, but their dynamics over time, mechanisms of occurrence and the genomic features that shape their distribution and rate are still poorly understood. We used allohaploid Brassica napus (AC, n = 19) as a model to analyze the effect of genomic features on the formation and diversity of meiotically driven chromosome rearrangements. We showed that allohaploid B.

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The dynamics of genome modification that occurred from the initial hybridization event to the stabilization of allopolyploid species remains largely unexplored. Here, we studied inheritance and expression of rDNA loci in the initial generations of Brassica napus allotetraploids (2n = 38, AACC) resynthesized from Brassica oleracea (2n = 18, CC) and B. rapa (2n = 20, AA) and compared the patterns to natural forms.

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  • Allopolyploid species have multiple sets of related chromosomes that need to be managed properly during meiosis for fertility.
  • The study focused on Brassica napus, a young allopolyploid, and identified two distinct meiotic phenotypes based on the number of univalents in the process.
  • Research revealed that the variations in meiotic behavior were linked to different genetic origins and alleles at the PrBn locus, suggesting varying mechanisms of crossover suppression among the species.
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Meiotic crossovers are necessary to generate balanced gametes and to increase genetic diversity. Even if crossover number is usually constrained, recent results suggest that manipulating karyotype composition could be a new way to increase crossover frequency in plants. In this study, we explored this hypothesis by analyzing the extent of crossover variation in a set of related diploid AA, allotriploid AAC, and allotetraploid AACC Brassica hybrids.

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  • Gene introgression in allopolyploid crops can occur through chromosome pairing during meiosis, leading to hybrid variations between different Brassica species.
  • Researchers created trigenomic hybrids (AABC, BBAC, CCAB) from Brassica napus, Brassica juncea, and Brassica carinata to study how genome structure affects chromosome pairing during meiosis.
  • Findings revealed that most homologous chromosomes paired effectively, but allosyndetic and autosyndetic associations varied based on the specific genomic structure of the hybrids and the genotype of the parent species.
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It has frequently been hypothesized that quantitative resistance increases the durability of qualitative (R-gene mediated) resistance but supporting experimental evidence is rare. To test this hypothesis, near-isogenic lines with/without the R-gene Rlm6 introduced into two Brassica napus cultivars differing in quantitative resistance to Leptosphaeria maculans were used in a 5-yr field experiment. Recurrent selection of natural fungal populations was done annually on each of the four plant genotypes, using crop residues from each genotype to inoculate separately the four series of field trials for five consecutive cropping seasons.

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  • The study focuses on the genetic regulation of recombination in allopolyploid plants like Brassica napus (canola) and highlights the importance of the PrBn locus in this process.
  • Researchers created haploid and euploid populations to analyze how differences in PrBn activity affect genetic changes during meiosis.
  • Results revealed that PrBn influences cross-over rates between nonhomologous chromosomes and shows variability in homologous recombination depending on the plant’s genetic makeup.
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  • Chromosomal rearrangements in Brassica napus arise primarily from homeologous recombination during meiosis, leading to various duplications and losses in its genome.
  • The study analyzes haploid crosses with euploid B. napus to determine the impact of genetic divergence on these rearrangements across three specific homeologous regions.
  • Findings indicate that about half of the observed chromosomal changes stem from primary homeological recombination, showcasing a significant increase in rearrangements compared to euploid counterparts, and some rearrangements likely result from recombination between paralogous regions.
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  • * The PrBn gene was mapped on the C genome linkage group DY15 and is responsible for controlling the genetic basis of homeologous chromosome pairing at metaphase I, though it shows variable expressivity.
  • * Additional minor QTL/BTL have been identified that influence pairing, and several other loci interact with PrBn, indicating a complex genetic network managing this pairing process in oilseed rape haploids.
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Polyploidization is a widespread process that results in the merger of two or more genomes in a common nucleus. To investigate modifications of gene expression occurring during allopolyploid formation, the Brassica napus allotetraploid model was chosen. Large-scale analyses of the proteome were conducted on two organs, the stem and root, so that >1600 polypeptides were screened.

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