Publications by authors named "Frank Boellmann"

Article Synopsis
  • Modern sequencing methods struggle to resolve gaps in the human genome, particularly in repetitive regions, affecting genes like MUC5AC, which is crucial for airway function.
  • The MUC5AC region has a gap in the human genome reference due to its complex, repetitive structure, necessitating high-fidelity long PCR and SMRT sequencing for complete assembly.
  • Using SMRT sequencing, researchers identified genetic variations, including duplications and single nucleotide changes within the MUC5AC gene, paving the way for further studies on its genetic functions and implications.
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Background: The heat shock response is widely used as a surrogate of the general protein quality control system within the cell. This system plays a significant role in aging and many protein folding diseases as well as the responses to other physical and chemical stressors.

Methods/principal Findings: In this study, a broad-based functional genomics approach was taken to identify potential regulators of the mammalian heat shock response.

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Alterations in DNA methylation have been proposed as a mechanism for the complex toxicological effects of arsenic. In this study, whole-genome DNA methylation and gene expression changes were evaluated in lungs from female mice exposed for 90 days to 50 ppm arsenate (As) in drinking water. DNA methylation changes were measured using reduced representation bisulfite deep sequencing.

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Many chemicals in commerce today have undergone limited or no safety testing. To reduce the number of untested chemicals and prioritize limited testing resources, several governmental programs are using high-throughput in vitro screens for assessing chemical effects across multiple cellular pathways. In this study, metabolic clearance and plasma protein binding were experimentally measured for 35 ToxCast phase I chemicals.

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The heat shock protein response appears to be triggered primarily by nonnative proteins accumulating in a stressed cell and results in increased expression of heat shock proteins (HSPs). Many heat shock proteins prevent protein aggregation and participate in refolding or elimination of misfolded proteins in their capacity as chaperones. Even though several mechanisms exist to regulate the abundance of cytosolic and nuclear chaperones, activation of heat shock transcription factor 1 (HSF1) is an essential aspect of the heat shock protein response.

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Exposure of cells to various stresses often leads to the induction of a group of proteins called heat shock proteins (HSPs, molecular chaperones). Hsp70 is one of the most highly inducible molecular chaperones, but its expression must be maintained at low levels under physiological conditions to permit constitutive cellular activities to proceed. Heat shock transcription factor 1 (HSF1) is the transcriptional regulator of HSP gene expression, but it remains poorly understood how newly synthesized HSPs return to basal levels when HSF1 activity is attenuated.

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Background: Heat shock factor (HSF/HSF1) not only is the transcription factor primarily responsible for the transcriptional response of cells to physical and chemical stress but also coregulates other important signaling pathways. The factor mediates the stress-induced expression of heat shock or stress proteins (HSPs). HSF/HSF1 is inactive in unstressed cells and is activated during stress.

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Article Synopsis
  • DAXX interacts with the trimeric form of human heat shock factor 1 (HSF1) during stress, suggesting it plays a key role in activating HSF1.
  • Overexpression of DAXX boosts HSF1's transactivation ability, while its depletion leads to reduced activation and heat shock protein (HSP)70 expression.
  • The study proposes that DAXX may counteract repression of HSF1 by a multichaperone complex, revealing its potential impact on heat shock protein modulation.
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