Zero and first-order phase shift correction for field map estimation with dual-echo GRE using bipolar gradients.

A simple phase error correction technique used for field map estimation with a generally available dual-echo gradient-echo (GRE) sequence is presented. Magnetic field inhomogeneity maps estimated using two separate GRE volume acquisitions at different echo times are prone to dynamic motion errors between acquisitions. By using the dual-echo sequence, the data are collected during two back-to-back readout gradients in opposite polarity after a single radio frequency pulse, and interecho motion artifacts and alignment errors in field map estimation can be factored out.

Diffeomorphic nonlinear transformations: a local parametric approach for image registration.

Many types of transformations are used to model deformations in medical image registration. While some focus on modeling local changes, some on continuity and invertibility, there is no closed-form nonlinear parametric approach that addresses all these properties. This paper presents a class of nonlinear transformations that are local, continuous and invertible under certain conditions.

Fast predictions of variance images for fan-beam transmission tomography with quadratic regularization.

Accurate predictions of image variances can be useful for reconstruction algorithm analysis and for the design of regularization methods. Computing the predicted variance at every pixel using matrix-based approximations [1] is impractical. Even most recently adopted methods that are based on local discrete Fourier approximations are impractical since they would require a forward and backprojection and two fast Fourier transform (FFT) calculations for every pixel, particularly for shift-variant systems like fan-beam tomography.

Estimating 3-D respiratory motion from orbiting views by tomographic image registration.

Respiratory motion remains a significant source of errors in treatment planning for the thorax and upper abdomen. Recently, we proposed a method to estimate two-dimensional (2-D) object motion from a sequence of slowly rotating X-ray projection views, which we called deformation from orbiting views (DOVs). In this method, we model the motion as a time varying deformation of a static prior of the anatomy.

Advanced three-dimensional tailored RF pulse for signal recovery in T2*-weighted functional magnetic resonance imaging.

T(2) (*)-weighted functional MR images are plagued by signal loss artifacts caused by susceptibility-induced through-plane dephasing. We present major advances to the original three-dimensional tailored RF (3DTRF) pulse method that pre-compensates the dephasing using three-dimensional selective excitation. The proposed 3DTRF pulses are designed iteratively with off-resonance incorporation and with a novel echo-volumar trajectory that frequency-encodes in z and phase-encodes in x,y.

Exploring breathing pattern irregularity with projection-based method.

Accurate descriptions of organ motion due to breathing are highly desirable for radiation treatment planning. This paper proposes an index that quantifies the irregularity of a signal related to respiratory motion. The method works by finding the periodic band-limited signal that best fits the signal samples, and then computing the root mean squared (RMS) residual error.

Spatial domain method for the design of RF pulses in multicoil parallel excitation.

Parallel excitation has been introduced as a means of accelerating multidimensional, spatially-selective excitation using multiple transmit coils, each driven by a unique RF pulse. Previous approaches to RF pulse design in parallel excitation were either formulated in the frequency domain or restricted to echo-planar trajectories, or both. This paper presents an approach that is formulated as a quadratic optimization problem in the spatial domain and allows the use of arbitrary k-space trajectories.

Dual energy CT attenuation correction methods for quantitative assessment of response to cancer therapy with PET/CT imaging.

We hypothesize that improved quantification for PET imaging of high atomic number materials can be achieved by combining low-dose x-ray imaging with dual energy CT for PET attenuation correction. Improved quantification of tracer uptake will lead to improved patient outcomes by providing more accurate information for therapeutic choices. Accurate PET/CT measurements of early response will be critical in determining the best cancer therapy option for each patient in a timely manner and in sparing patients the morbidity and cost of ineffective treatments.

Incorporation of system resolution compensation (RC) in the ordered-subset transmission (OSTR) algorithm for transmission imaging in SPECT.

In order to reconstruct attenuation maps with improved spatial resolution and quantitative accuracy, we developed an approximate method of incorporating system resolution compensation (RC) in the ordered-subset transmission (OSTR) algorithm for transmission reconstruction. Our method approximately models the blur caused by the finite intrinsic detector resolution, the nonideal source collimation and detector collimation. We derived the formulation using the optimization transfer principle as in the derivation of the OSTR algorithm.

Fourier-based forward and back-projectors in iterative fan-beam tomographic image reconstruction.

Fourier-based forward and back-projection methods can reduce computation in iterative tomographic image reconstruction. Recently, an optimized nonuniform fast Fourier transform (NUFFT) approach was shown to yield accurate parallel-beam projections. In this paper, we extend the NUFFT approach to describe an O (N2 log N) projector/backprojector pair for fan-beam transmission tomography.

[Qualitative and economc impact of implementing GP guidelines in a medical practitioners' network].

The aims of the study were to determine whether the participants of a practitioners' network changed their prescribing behaviour according to the guidelines discussed and to assess the implications for drug costs. Guidelines concerning the prescription of lipid-lowering drugs, antidiabetics and cardiovascular drugs were introduced in quality circles with about 90 participants in a practitioners' network. All statutory health care insurance physicians of Hesse served as comparison group.

Evaluation of surgical treatment for signs of acute abdominal pain in draft horses: 72 cases (1983-2002).

Objective: To determine whether heavy (> or = 680 kg [> or = 1,500 lb]) draft horses undergoing surgical treatment for acute signs of abdominal pain were at a greater risk for anesthetic and postoperative complications and lower postoperative survival rates than light (< 680 kg) draft horses.

Design: Retrospective case series.

Animals: 72 draft horses.

Convergent incremental optimization transfer algorithms: application to tomography.

No convergent ordered subsets (OS) type image reconstruction algorithms for transmission tomography have been proposed to date. In contrast, in emission tomography, there are two known families of convergent OS algorithms: methods that use relaxation parameters, and methods based on the incremental expectation-maximization (EM) approach. This paper generalizes the incremental EM approach by introducing a general framework, "incremental optimization transfer.

Analysis of observer performance in known-location tasks for tomographic image reconstruction.

We consider the task of detecting a statistically varying signal of known location on a statistically varying background in a reconstructed tomographic image. We analyze the performance of linear observer models in this task. We show that, if one chooses a suitable reconstruction method, a broad family of linear observers can exactly achieve the optimal detection performance attainable with any combination of a linear observer and linear reconstructor.

3-D Monte Carlo-Based Scatter Compensation in Quantitative I-131 SPECT Reconstruction.

We have implemented highly accurate Monte Carlo based scatter modeling (MCS) with 3-D ordered subsets expectation maximization (OSEM) reconstruction for I-131 single photon emission computed tomography (SPECT). The scatter is included in the statistical model as an additive term and attenuation and detector response are included in the forward/backprojector. In the present implementation of MCS, a simple multiple window-based estimate is used for the initial iterations and in the later iterations the Monte Carlo estimate is used for several iterations before it is updated.

Iterative RF pulse design for multidimensional, small-tip-angle selective excitation.

The excitation k-space perspective on small-tip-angle selective excitation has facilitated RF pulse designs in a range of MR applications. In this paper, k-space-based design of multidimensional RF pulses is formulated as a quadratic optimization problem, and solved efficiently by the iterative conjugate-gradient (CG) algorithm. Compared to conventional design approaches, such as the conjugate-phase (CP) method, the new design approach is beneficial in several regards.

Local phylogenetic divergence and global evolutionary convergence of skull function in reef fishes of the family Labridae.

The Labridae is one of the most structurally and functionally diversified fish families on coral and rocky reefs around the world, providing a compelling system for examination of evolutionary patterns of functional change. Labrid fishes have evolved a diverse array of skull forms for feeding on prey ranging from molluscs, crustaceans, plankton, detritus, algae, coral and other fishes. The species richness and diversity of feeding ecology in the Labridae make this group a marine analogue to the cichlid fishes.

Respiratory motion estimation from slowly rotating x-ray projections: theory and simulation.

Understanding the movement of tumors caused by respiratory motion is very important for conformal radiatherapy. However, respiratory motion is very difficult to study by conventional x-ray CT imaging since object motion causes inconsistent projection views, leading to artifacts in reconstructed images. We propose to estimate the parameters of a nonrigid, free breathing motion model from a set of projection views of the thorax that are acquired using a slowly rotating cone-beam CT scanner.

Conjugate phase MRI reconstruction with spatially variant sample density correction.

A new image reconstruction method to correct for the effects of magnetic field inhomogeneity in non-Cartesian sampled magnetic resonance imaging (MRI) is proposed. The conjugate phase reconstruction method, which corrects for phase accumulation due to applied gradients and magnetic field inhomogeneity, has been commonly used for this case. This can lead to incomplete correction, in part, due to the presence of gradients in the field inhomogeneity function.

[The Guideline Clearing Project COPD. Recommendations for a National Guideline].

In order to promote the care of patients with COPD in Germany a national guideline clearing project was initiated jointly by autonomous corporate bodies of the German health care system. Following a systematic search of literature data bases between 1992 and 2002, 20 guidelines were identified that met the inclusion criteria and were evaluated with the German Checklist for Methodological Guideline Appraisal. Following this, a multidisciplinary expert group appointed by the German Guideline Clearinghouse (Leitlinien-Clearingstelle im Arztlichen Zentrum fur Qualitat in der Medizin, AZQ) reviewed the suitability of these guidelines for the use in the German health care system.

Efficient calculation of resolution and covariance for penalized-likelihood reconstruction in fully 3-D SPECT.

Resolution and covariance predictors have been derived previously for penalized-likelihood estimators. These predictors can provide accurate approximations to the local resolution properties and covariance functions for tomographic systems given a good estimate of the mean measurements. Although these predictors may be evaluated iteratively, circulant approximations are often made for practical computation times.

Intensity-based image registration using robust correlation coefficients.

The ordinary sample correlation coefficient is a popular similarity measure for aligning images from the same or similar modalities. However, this measure can be sensitive to the presence of "outlier" objects that appear in one image but not the other, such as surgical instruments, the patient table, etc., which can lead to biased registrations.

Pragmatic fully 3D image reconstruction for the MiCES mouse imaging PET scanner.

We present a pragmatic approach to image reconstruction for data from the micro crystal elements system (MiCES) fully 3D mouse imaging positron emission tomography (PET) scanner under construction at the University of Washington. Our approach is modelled on fully 3D image reconstruction used in clinical PET scanners, which is based on Fourier rebinning (FORE) followed by 2D iterative image reconstruction using ordered-subsets expectation-maximization (OSEM). The use of iterative methods allows modelling of physical effects (e.

Surgical management of compound odontoma in two horses.

Two horses were admitted for evaluation of mandibular swelling (horse 1) or maxillary distortion (horse 2). Both horses had radiographic evidence of tumors of dental origin that had the appearance of a compound odontoma. Extensive surgical resection was performed for treatment.