Publications by authors named "Fernanda R Rocho"

Article Synopsis
  • The main protease (M) of SARS-CoV-2 is crucial for viral replication and is a key target for developing treatments against coronaviruses, especially with new variants emerging.
  • Researchers examined protease activity from the original strain and variants Beta1, Beta2, and Omicron, finding that while there were some differences in activity on larger protein substrates, the mutations had little effect on smaller peptide substrates.
  • The study suggests that inhibitors designed for the original strain's M will likely remain effective against current variants, as mutations in the M sequence are rare and don’t significantly alter how the protease interacts with peptide-based molecules.
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Nitriles have broad applications in medicinal chemistry, with more than 60 small molecule drugs on the market containing the cyano functional group. In addition to the well-known noncovalent interactions that nitriles can perform with macromolecular targets, they are also known to improve drug candidates' pharmacokinetic profiles. Moreover, the cyano group can be used as an electrophilic warhead to covalently bind an inhibitor to a target of interest, forming a covalent adduct, a strategy that can present benefits over noncovalent inhibitors.

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Introduction: Cathepsin K (CatK) is a lysosomal cysteine protease and the predominant cathepsin expressed in osteoclasts, where it degrades the bone matrix. Hence, CatK is an attractive therapeutic target related to diseases characterized by bone resorption, like osteoporosis.

Areas Covered: This review summarizes the patent literature from 2011 to 2021 on CatK inhibitors and their potential use as new treatments for osteoporosis.

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Peptidomimetics of the class of dipeptidyl nitrile analog peptoids were synthesized as inhibitors of mammalian cysteine proteases of the papain superfamily. The dipeptidyl nitrile side chains were attached to the peptide backbone's nitrogen atom, not to the α-carbons. Synthesized nitrile-based peptoid analogs that lack the hydrogen amide at P2-P3 are responsible for many of the secondary structure elements in peptides and proteins, making them resistant to proteolysis.

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