Publications by authors named "Fangru Nan"

Functional groups (FGs) represent a classification scheme designed to study the ecological adaptations of phytoplankton. However, FG dynamics studies in phytoplankton are often conducted independent of taxonomic studies, so the factors influencing community dynamics have not been sufficiently investigated or compared between the two classification systems. In this study, we compared the intricate relationship between taxonomic and FG compositions in North China lakes and delve into the key environmental drivers shaping phytoplankton community dynamics.

View Article and Find Full Text PDF

Freshwater systems are critical yet often underestimated components of global carbon cycling, functioning both as carbon sinks and sources. Cyanobacteria play a key role in this cycle by capturing atmospheric carbon dioxide through photosynthesis. The captured carbon is either released back into the atmosphere or sequestered in sediments following organismal decay.

View Article and Find Full Text PDF
Article Synopsis
  • The genus in question contains only one species, characterized by a unique structure with a central axis and peripheral branches covered in a gelatinous coating, but there is limited molecular data on its phylogenetic relationships.
  • A new population of the freshwater alga has been found in the Fenhe River, China, where researchers collected various physical and chemical water data and performed detailed morphological observations.
  • The study constructed a phylogenetic tree showing a close relationship between the Chinese specimen and one from Norway, revealing divergence timelines that enhance our understanding of the genus's evolution and geographical distribution.
View Article and Find Full Text PDF

Dissolved organic matter (DOM) and recalcitrant dissolved organic matter (RDOM) play distinct roles in shaping microbial communities. However, characterizing these roles is difficult, especially in ecosystems subjected to varying degrees of anthropogenic influence. This study investigated the molecular compositions and ecological impacts of DOM and RDOM in the Fen River, Shanxi Taiyuan, comparing pristine upstream regions with highly urbanized downstream areas.

View Article and Find Full Text PDF
Article Synopsis
  • The study investigated the best conditions for producing Spirulina blended liquor (SBL) and Spirulina fermented wine (SFW), focusing on maximizing polysaccharide yield using response surface methodology.
  • The optimal preparation for SBL involved a liquor base of 42% vol, ultrasonication for 37 minutes at 80 W, resulting in polysaccharide and alcohol contents of 0.2181 g/L and 39.7% vol, respectively.
  • For SFW, the ideal fermentation took place at 22°C with a 4% inoculum over 6 days, yielding higher polysaccharide (8.533 g/L) but lower alcohol content (11.2% vol), with SFW showing better antioxidant properties
View Article and Find Full Text PDF

Human activities have significantly altered the biogeochemical cycles of carbon, nitrogen, and sulfur in aquatic ecosystems, leading to ecological problems.This study utilized 16S rRNA gene high-throughput sequencing and excitation-emission matrix parallel factor analysis (EEM-PARAFAC) to evaluate the bacterial community composition and dissolved organic matter structure in the upstream (less impacted) and downstream (severely impacted) sections of the river, with a focus on the interactions between bacterial diversity and dissolved organic matter (DOM) characteristics.Results indicated significant spatial diversity in bacterial communities, with a higher α-diversity upstream compared to the more polluted downstream sections.

View Article and Find Full Text PDF

Microbial communities are pivotal in aquatic ecosystems, as they affect water quality, energy dynamics, nutrient cycling, and hydrological stability. This study explored the effects of rainfall on hydrological and photosynthetic parameters, microbial composition, and functional gene profiles in the Fen River. Our results demonstrated that rainfall-induced decreases in stream temperature, dissolved oxygen, pH, total phosphorus, chemical oxygen demand, and dissolved organic carbon concentrations.

View Article and Find Full Text PDF
Article Synopsis
  • Salt stress impacts plant growth, but less is known about calcium stress, particularly in algae.
  • This study examines how a specific algal strain tolerates high calcium levels through transcriptomics, physiological, and morphological analysis, using CaCl concentrations significantly above standard growth conditions.
  • Findings show the algae maintain growth and photosynthetic efficiency under high calcium stress by enhancing photosynthesis, producing antioxidants, and generating free amino acids for osmotic regulation, even though there is a reduction in chlorophyll content.
View Article and Find Full Text PDF
Article Synopsis
  • The study examines how polystyrene nanoplastics (PS-NPs) affect the growth and physiological features of the freshwater microalga Scenedesmus quadricauda at various concentrations (10 to 200 mg/L).
  • Results indicated that higher concentrations of nanoplastics enhanced algal density and increased levels of chlorophyll, soluble proteins, and polysaccharides while activating antioxidant enzymes.
  • The research also proposes three mechanisms by which Scenedesmus quadricauda tolerates PS-NPs: thickening of the cell wall, internalizing the nanoplastics, and aggregating them, highlighting the ecological risks posed by nanoplastics to freshwater ecosystems.
View Article and Find Full Text PDF
Article Synopsis
  • Batrachospermaceae, a crucial family of freshwater red algae, is suffering habitat loss due to global ecological decline, highlighting the need for research on its environmental factors and classification.
  • The study utilized machine learning methods (random forest and XGBoost) to analyze the relationship between environmental factors and the classification of Batrachospermaceae, achieving high accuracy in distinguishing its genera.
  • Key environmental factors affecting the classification were found to be altitude, average relative humidity, average temperature, and minimum temperature, with altitude being the most significant.
View Article and Find Full Text PDF

The freshwater red algal order Thoreales has a triphasic life history, of which the "Chantransia" phase is a small filamentous sporophyte. The "Chantransia" stage is difficult to distinguish from species in the genus by its morphological characteristics. In this study, five "Chantransia" isolates (GX41, GX81, GD224, GD225, GD228) were collected from Guangxi Zhuang Autonomous Region and Guangdong Province in China.

View Article and Find Full Text PDF

Background: MicroRNA (miRNA) is a key regulator at the gene posttranscriptional regulation level. We have previously identified miRNAs and their putative targets in 3 representative red algae, , and .

Objectives: In this study, unique molecular and evolutionary characterization of miRNAs were revealed in the 3 red algae based on the comparative miRNAs profiling.

View Article and Find Full Text PDF

To study the relationship between β-carotene synthesis and geranylgeranyl pyrophosphate synthase (GGPS) activity, 15 species of were used to determine the changes in photosynthetic pigment contents, chlorophyll fluorescence parameters, β-carotene content, and GGPS activity. By observing the morphology and size of 15 species of , D8 has the largest individual algal cell and D9 has the smallest individual. Growth was relatively slow during days one through seven.

View Article and Find Full Text PDF

The seasonal and spatial eukaryotic phytoplankton composition in the Fenhe River was investigated based on the 18S rDNA V4 region. The relationship between phytoplankton functional groups and environmental factors was explored to effectively capture the responses of these taxa to environmental gradients and their effects on ecosystem function. Our results indicated that the Chlorophyta and Bacillariophyta had higher relative abundance than other taxa, and their diversity and richness indices in spring were higher than those in other seasons.

View Article and Find Full Text PDF
Article Synopsis
  • Salinity is a significant challenge for plants, and the study focuses on two high-salt-tolerant microalgae species, Dunaliella bioculata and Dunaliella quartolecta, to assess their responses to salt stress.
  • D. bioculata exhibited higher chlorophyll content, while D. quartolecta showed greater lipid and carotenoid levels, indicating different adaptive strategies under salinity conditions.
  • Novel gene analysis revealed that D. quartolecta is more halophilic than D. bioculata, with specific genes responding variably to increasing salinity, suggesting differences in their physiological adaptations to stress.
View Article and Find Full Text PDF

Members of coccoid green algae have been documented in various extreme environments. In this article, a unicellular green alga was found to slowly grow in high concentration (3.6 g/L) and pure calcium chloride solution in the laboratory.

View Article and Find Full Text PDF

Background: As a thermoacidophilic microalga,  has a unique biological function. MicroRNA (miRNA) plays an important regulating role in plant various stress responses.

Objective: In this study, we identified lots of conserved and novel miRNAs in  (gsu-miRNAs), and predicted their putative targets for the first time.

View Article and Find Full Text PDF

TY isolated from the lawn soil belongs to Trebouxiophyceae, Chlorophyta. The complete mitogenome of sequenced and described. It is a circular duplex molecule 64,744 bp in length consisting of 28 protein-coding genes, 23 transfer RNA () genes, four ribosomal RNA () genes, and one putative open reading frames (ORFs).

View Article and Find Full Text PDF

The oleaginous microalgae species GD is a promising feedstock for biodiesel production from soil. However, its metabolic mechanism of lipid production remains unclear. In this study, the lipid accumulation and metabolism mechanisms of GD were analyzed under salt stress based on transcriptome sequencing.

View Article and Find Full Text PDF

The adaptive evolution and coevolution of the ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (L) gene in the genus were studied based on phylogenetic tree construction and the physicochemical properties and the secondary structures of protein encoded by L (Rubisco large subunit) were analyzed. The amino acids compositions and grand average of hydropathicity of freshwater and marine were similar. Rubisco large subunit of was hydrophilic and the secondary structure was primarily composed of α-helixes and β-sheets, revealing the relatively stable structure of this protein.

View Article and Find Full Text PDF

To research the adaptive evolution and coevolution of the rbcL gene in the genus Galdieria, 36 sequences were selected. The bioinformatics of proteins encoded by rbcL genes of Galdieria were analyzed, and phylogenetic trees were constructed by the maximum-likelihood method. Then, adaptive evolution and coevolution were analyzed.

View Article and Find Full Text PDF

Green euglenophytes are a group of eukaryotes with ancient origin. In order to understand the evolution of the group, it is interesting to know which characteristics are more primitive. Here, a phylogenetic tree of green euglenophytes based on the 18S rRNA gene was constructed, and ancestral states were reconstructed based on eight morphological characters.

View Article and Find Full Text PDF

Inorganic coagulants have been widely used to harvest microalgal biomass. A great deal of attention has been mainly focused on the response of harvesting efficiency, lipid production and feasibility of the reuse of medium to inorganic coagulants. The physiological state of harvested cells and feasibility of wastewater treatment remain unclear.

View Article and Find Full Text PDF

Thorea hispida exclusively inhabits freshwater environments and is characterized by a triphasic life history. In this study, the organelle genomes and transcriptomes of different life history stages of T. hispida were examined using next generation sequencing.

View Article and Find Full Text PDF

Large-scale, inter-basin water diversion projects have been developed to relieve water scarcity crisis and water pollution problems. Environmental status and ecosystem impacts are largely unknown for the Wanjiazhai Yellow River Diversion Project (YRDP-WJZ), a water body critical in northern China. In the current study, twelve hydrochemical indices (including Mn, Cu, Zn, Hg, Pb, NH-N, COD-Mn, DO, BOD, COD, TP, and TN) were collected from 2008 to 2017 based on multiple analytical approaches to understand environmental status and ecological risks.

View Article and Find Full Text PDF