A quick, easy, cheap, effective, rugged, and safe method was developed for the multi-residue analysis of pesticides and antibiotics in aquaculture sediment using high-performance liquid chromatography-tandem mass spectrometry (HPLC-MS/MS). The developed method is based on ultrasonic extraction with acetonitrile and phosphate buffer, salting with sodium chloride, and cleaning with dispersive solid-phase extraction adsorbent using primary secondary amine, C, and graphitized carbon black, followed by HPLC-MS/MS detection. We optimized different extraction methods and the ratio of the cleanup adsorbents to achieve good recoveries at three spiking levels that ranged from 60.
View Article and Find Full Text PDFThis study integrates hollow microneedle arrays (HMNA) with a novel jellyfish-shaped electrochemical sensor for the detection of key biomarkers, including uric acid (UA), glucose, and pH, in artificial interstitial fluid. The jellyfish-shaped sensor displayed linear responses in detecting UA and glucose via differential pulse voltammetry (DPV) and chronoamperometry, respectively. Notably, the open circuit potential (OCP) of the system showed a linear variation with pH changes, validating its pH-sensing capability.
View Article and Find Full Text PDFDeepKa is a deep-learning-based protein p predictor proposed in our previous work. In this study, a web server was developed that enables online protein p prediction driven by DeepKa. The web server provides a user-friendly interface where a single step of entering a valid PDB code or uploading a PDB format file is required to submit a job.
View Article and Find Full Text PDFpH regulates protein structures and the associated functions in many biological processes via protonation and deprotonation of ionizable side chains where the titration equilibria are determined by p's. To accelerate pH-dependent molecular mechanism research in the life sciences or industrial protein and drug designs, fast and accurate p prediction is crucial. Here we present a theoretical p data set PHMD549, which was successfully applied to four distinct machine learning methods, including DeepKa, which was proposed in our previous work.
View Article and Find Full Text PDFIntroduction: Prenatal exposure to polycyclic aromatic hydrocarbons (PAHs) is a risk factor for the occurrence of congenital heart diseases (CHDs). Genetic susceptibility to PAHs metabolism may modify the exposure-risk relationship. The role of uridine diphosphoglucuronosyl transferase 1A1 () genetic polymorphisms for modulating the impacts of prenatal PAHs exposure on the risk of CHDs remains to be discovered.
View Article and Find Full Text PDFIn this study, hexabromocyclododecane (HBCD) was detected in 114 fish samples collected from 6 administrative regions of Xiamen city, China. HBCD amounts ranged between ND (not detected) and 2.216 ng g ww (mean, 0.
View Article and Find Full Text PDFProtein p prediction is essential for the investigation of the pH-associated relationship between protein structure and function. In this work, we introduce a deep learning-based protein p predictor DeepKa, which is trained and validated with the p values derived from continuous constant-pH molecular dynamics (CpHMD) simulations of 279 soluble proteins. Here, the CpHMD implemented in the Amber molecular dynamics package has been employed (Huang Y.
View Article and Find Full Text PDFPeople often concern the relationships between symptoms and diseases when seeking medical advices. In this paper, medical data are divided into three copies, records related to main disease categories, records related to subclass disease types, and records of specific diseases firstly; then two disease recognition methods only based on symptoms for the main disease category identification, subclass disease type identification, and specific disease identification are given. In the methods, a neural network and a support vector machine (SVM) algorithms are adopted, respectively.
View Article and Find Full Text PDFFront Bioeng Biotechnol
June 2021
Protein secondary structures have been identified as the links in the physical processes of primary sequences, typically random coils, folding into functional tertiary structures that enable proteins to involve a variety of biological events in life science. Therefore, an efficient protein secondary structure predictor is of importance especially when the structure of an amino acid sequence fragment is not solved by high-resolution experiments, such as X-ray crystallography, cryo-electron microscopy, and nuclear magnetic resonance spectroscopy, which are usually time consuming and expensive. In this paper, a reductive deep learning model MLPRNN has been proposed to predict either 3-state or 8-state protein secondary structures.
View Article and Find Full Text PDFTissue structural anisotropy is an important basis for heart function. Attempts to regenerate the complicated heart-tissue alignment has rarely featured macroscale 3D constructs required for myocardial tissue engineering. The feasibility of engineered scaffolds with micro/macro-architecture for guiding spatial cell alignment following complex patterns is reported.
View Article and Find Full Text PDFIndicator polychlorinated biphenyls (PCBs) and organochlorine pesticides (OCPs) were determined in 289 seafood samples including fishes, crustaceans, and shellfish collected from six administrative regions in Xiamen of China. The residual levels of PCBs, dichlorodiphenyltrichloroethane and its metabolites (DDTs), and hexachlorocyclohexanes (HCHs) ranged
ACS Appl Mater Interfaces
June 2015
Human endothelial basement membrane (BM) plays a pivotal role in vascular development and homeostasis. Here, a bioresponsive film with dual-microstructured geometries was engineered to mimic the structural roles of the endothelial BM in developing vessels, for vascular tissue engineering (TE) application. Flexible poly(ε-caprolactone) (PCL) thin film was fabricated with microscale anisotropic ridges/grooves and through-holes using a combination of uniaxial thermal stretching and direct laser perforation, respectively.
View Article and Find Full Text PDFEnhancement of pulsed laser ablation can be achieved in acetic acid as an environmentally friendly liquid. This paper evaluates microholes and textured features induced by a nanosecond pulsed laser under different processing circumstances. The microholes are fabricated by laser drilling in acetic acid and found to be 100% deeper than in air.
View Article and Find Full Text PDFZhonghua Xin Xue Guan Bing Za Zhi
March 2013
Objective: To explore the effects of trimetazidine therapy on left ventricular (LV) function after percutaneous coronary intervention (PCI).
Methods: A total of 106 patients with unstable angina pectoris underwent successful elective PCI were randomly assigned to standard therapy group (control, n = 55) or trimetazidine group (n = 51, 60 mg trimetazidine loading dose prior to PCI followed by 20 mg Tid after PCI on top of standard therapy). cTnI level was measured before and at 16-18 hours after PCI.
We report the formation of inverted microstructures inside glasses after femtosecond laser irradiation by tuning the refractive index contrast between the immersion liquid and the glass sample. By using water as well as 1-bromonaphthalene as immersion liquids, microstructures with similar shape but opposite directions are induced after femtosecond laser irradiation. Interestingly, the elemental distribution in the induced structures is also inverted.
View Article and Find Full Text PDFCrystalline Ge was induced space selectively inside a borosilicate glass by 800 nm, 250 kHz femtosecond laser irradiation. Micro-Raman spectra and x-ray diffraction analysis confirmed that the laser-induced crystals were cubic Ge. A periodic structure consisting of Ge crystalline lines was inscribed in the glass sample by continuously moving the focal point of the laser beam.
View Article and Find Full Text PDFControllable microstructures are formed on a glass surface after irradiation of a focused 800 nm, 250 KHz femtosecond laser beam. Field-emission scanning electron microscope and 3D measuring laser microscope images reveal that the induced structures are circular and linear protuberances and can be controlled from 10 microm to hundreds of micrometers in width, and from 1 microm to tens of micrometers in height. The protuberance structure is proposed to be formed as a consequence of the laser-induced high temperature and pressure owing to linear and nonlinear absorption near the laser focal point, and low softening and melting temperature of the glass sample.
View Article and Find Full Text PDFThe redistribution of elements in a multicomponent oxyfluoride glass is induced by a 250 kHz femtosecond laser. Elemental distribution in the cross section of the modified region along the laser propagation axis is analyzed by an electron microprobe analyzer. The results indicate that the relative concentrations of network formers of the glass are higher in the central area of the modified region and lower in the periphery of the modified region compared with the unirradiated areas.
View Article and Find Full Text PDFWei Sheng Wu Xue Bao
February 2005
Virus isolate G2 was isolated from tomato plants showing leaf curl symptoms in Guangdong. The complete nucleotide sequence of G2 DNA-A was determined to be 2744 nucleotides encoding six potential ORFs, with two (AV1 and AV2) in virus sense and four (AC1, AC2, AC3 and AC4) in complementary sense. G2 DNA-A has a typical characteristics of Begomovirus genome organization.
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