Publications by authors named "F J Naya"

The coordinate regulation of metabolism and epigenetics to establish cell state-specific gene expression patterns during lineage progression is a central aspect of cell differentiation, but the factors that regulate this elaborate interplay are not well-defined. The imprinted Dlk1-Dio3 noncoding RNA (ncRNA) cluster has been associated with metabolism in various progenitor cells, suggesting it functions as a regulator of metabolism and cell state. Here, we directly demonstrate that the Dlk1-Dio3 ncRNA cluster coordinates mitochondrial respiration and chromatin structure to maintain proper cell state.

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Article Synopsis
  • Human induced pluripotent stem cell-derived cardiomyocytes (hiPSC-CMs) lack critical nanoscale structures called dyads that are vital for heart function, especially during heart failure.
  • The reduced expression of the protein cardiomyopathy-associated 5 (CMYA5) leads to disorganization of these dyads in heart failure and disrupts their assembly in hiPSC-CMs.
  • A miniaturized version of CMYA5 delivered via adeno-associated virus effectively improved the structure of dyads and normalized heart function under stress, enhancing calcium handling and contractile forces in hiPSC-CMs.
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Cardiac excitation-contraction coupling requires dyads, the nanoscopic microdomains formed adjacent to Z-lines by apposition of transverse tubules and junctional sarcoplasmic reticulum. Disruption of dyad architecture and function are common features of diseased cardiomyocytes. However, little is known about the mechanisms that modulate dyad organization during cardiac development, homeostasis, and disease.

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Non-coding RNAs (ncRNAs) play a key role in the regulation of transcriptional and epigenetic activity in mammalian cells. Comprehensive analysis of these ncRNAs has revealed sophisticated gene regulatory mechanisms which finely tune the proper gene output required for cellular homeostasis, proliferation, and differentiation. However, this elaborate circuitry has also made it vulnerable to perturbations that often result in disease.

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Formation of skeletal muscle is among the most striking examples of cellular plasticity in animal tissue development, and while muscle progenitor cells are reprogrammed by epithelial-mesenchymal transition (EMT) to migrate during embryonic development, the regulation of EMT in post-natal myogenesis remains poorly understood. Here, we demonstrate that the long noncoding RNA (lncRNA) regulates EMT in myoblast differentiation and skeletal muscle regeneration. Chronic inhibition of in C2C12 myoblasts induced EMT, and suppressed cell state transitions required for differentiation.

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