Generating Artificial Ribozymes Using Sparse Coevolutionary Models.

RNA ribozyme (Walter Engelke, Biologist (London, England) 49:199-203, 2002) datasets typically contain from a few hundred to a few thousand naturally occurring sequences. However, the potential sequence space of RNA is huge. For example, the number of possible RNA sequences of length 150 nucleotides is approximately , a figure that far surpasses the estimated number of atoms in the known universe, which is around .

Assessment of CSF Dynamics Using Infusion Study: Tips and Tricks.

Idiopathic normal pressure hydrocephalus, secondary chronic hydrocephalus, and other cerebrospinal fluid (CSF) disorders are often challenging to diagnose. Since shunt surgery is usually the only therapeutic option and carries significant morbidity, optimal patient selection is crucial. The tap test is the most commonly used prognostic test to confirm the diagnosis but lacks sensitivity.

Towards parsimonious generative modeling of RNA families.

Generative probabilistic models emerge as a new paradigm in data-driven, evolution-informed design of biomolecular sequences. This paper introduces a novel approach, called Edge Activation Direct Coupling Analysis (eaDCA), tailored to the characteristics of RNA sequences, with a strong emphasis on simplicity, efficiency, and interpretability. eaDCA explicitly constructs sparse coevolutionary models for RNA families, achieving performance levels comparable to more complex methods while utilizing a significantly lower number of parameters.

Changes in treatment of intracranial aneurysms during the last decade in a large European neurovascular center.

Objective: Treatment modality for ruptured and unruptured intracranial aneurysms has shifted during the last two decades from microsurgical treatment towards endovascular treatment. We present how this transition happened in a large European neurovascular center.

Methods: We conducted a retrospective observational study consecutive patients treated for an unruptured or ruptured intracranial aneurysm at Helsinki University Hospital during 2012-2022.