Publications by authors named "Erik Thomsen"

During the last glaciation, the northern hemisphere experienced profound millennial-scale changes (termed Dansgaard-Oeschger (DO) events) in atmospheric and oceanic temperatures. In the North Atlantic, the fluctuations resulted in extremely unstable bottom water conditions with bottom water temperatures (BWT) varying up to > 5 °C. We have studied these changes in a core from 1,300 m water depth at Vestnesa Ridge, northwestern Svalbard margin to investigate a possible connection between BWT and seepage of methane from the seafloor covering the period ~ 50-6 ka.

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Velocity estimation in ultrasound imaging is a technique to measure the speed and direction of blood flow. The flow velocity in small blood vessels, i.e.

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Super-resolution ultrasound imaging using the erythrocytes (SURE) has recently been introduced. The method uses erythrocytes as targets instead of fragile microbubbles (MBs). The abundance of erythrocyte scatterers makes it possible to acquire SURE data in just a few seconds compared with several minutes in ultrasound localization microscopy (ULM) using MBs.

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Spherical diverging acoustic lenses mounted on flat 2-D row-column-addressed (RCA) ultrasound transducers have shown the potential to extend the field of view (FOV) from a rectilinear to a curvilinear volume region and, thereby, enable 3-D imaging of large organs. Such lenses are usually designed for small aperture low-frequency transducers, which have limited resolution. Moreover, they are made of off-the-shelf pieces of materials, which leaves no room for optimization.

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Coded excitation (CE) has the ability to enhance image quality and penetration depth by improving the signal-to-noise ratio (SNR). Their usefulness has been extensively proven in the literature, however, there are very few publications that have discussed the practicality of using CEs, as they can increase the operating temperature of a transducer beyond the safety limits. In this paper, the potential for capacitive micromachined ultrasonic transducers (CMUTs) to handle CEs is investigated and compared to a geometrically similar Lead Zirconate Titanate (PZT) probe.

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Article Synopsis
  • Capacitive micromachined ultrasonic transducers (CMUTs) have a nonlinear voltage-signal relationship that can hinder traditional contrast enhanced ultrasound (CEUS) techniques.
  • A new three-pulse amplitude modulation (AM) sequence has been introduced to mitigate these issues, showing better results with CMUTs compared to the conventional methods.
  • Experimental results indicate that CMUTs can produce effective CEUS images with minimal degradation in signal quality, achieving high contrast-to-tissue ratio improvements using this new sequence.
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Row-column (RC) arrays have the potential to yield full 3-D ultrasound imaging with a greatly reduced number of elements compared to fully populated arrays. They, however, have several challenges due to their special geometry. This review article summarizes the current literature for RC imaging and demonstrates that full anatomic and functional imaging can attain a high quality using synthetic aperture (SA) sequences and modified delay-and-sum beamforming.

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Using a diverging lens on a row-column array (RCA) can increase the size of its volumetric image and thus significantly improve its clinical value. Here, a ray tracing method is presented to predict the position of the transmitted wave so that it can be used to make beamformed images. The usable transmitted field-of-view (FOV) is evaluated for a lensed 128 + 128 element RCA by comparing the theoretic prediction of the emitted wavefront position with three-dimensional (3D) finite element simulation of the emitted field.

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This study evaluates the use of 3D printed phantoms for 3D super-resolution ultrasound imaging (SRI) algorithm calibration. The main benefit of the presented method is the ability to do absolute 3D micro-positioning of sub-wavelength sized ultrasound scatterers in a material having a speed of sound comparable to that of tissue. Stereolithography is used for 3D printing soft material calibration micro-phantoms containing eight randomly placed scatterers of nominal size 205 μm × 205 μm × 200 μm.

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Article Synopsis
  • Delay-and-sum (DAS) beamforming struggles with high-density scatterer detection, leading to overlapping point spread functions that complicate identification.
  • A convolutional neural network (CNN) was developed to process radio frequency channel data and create non-overlapping Gaussian confidence maps, effectively localizing scatterers even beyond DAS resolution limits.
  • In tests with simulated and measured data, the CNN achieved high precision and recall rates, showing promise for applications like better detection of microbubbles in super-resolution ultrasound imaging.
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A 3-D super-resolution (SR) pipeline based on data from a row-column (RC) array is presented. The 3-MHz RC array contains 62 rows and 62 columns with a half wavelength pitch. A synthetic aperture (SA) pulse inversion sequence with 32 positive and 32 negative row emissions is used for acquiring volumetric data using the SARUS research ultrasound scanner.

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This study evaluates the volumetric imaging performance of two prototyped 62 + 62 row-column-addressed (RCA) 2-D array transducer probes using three synthetic aperture imaging (SAI) emission sequences and two different beamformers. The probes are fabricated using capacitive micromachined ultrasonic transducer (CMUT) and piezoelectric transducer (PZT) technology. Both have integrated apodization to reduce ghost echoes and are designed with similar acoustical features, i.

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This paper addresses the importance of having control over the resistivity of the electrodes for capacitive micromachined ultrasonic transducers (CMUT) devices. The electrode resistivity can vary depending on the fabrication technology used, and resistivity control becomes especially important in the cases where metal electrodes can not be used. This raises the question: When is the resistivity of an electrode sufficiently low? To answer this question we have developed a simple design criterion.

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The application of Sr/Sr in prehistoric mobility studies requires accurate strontium reference maps. These are often based from present-day surface waters. However, the use of agricultural lime in low to noncalcareous soils can substantially change the Sr/Sr compositions of surface waters.

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During the late Eocene, the Earth's climate experienced several transient temperature fluctuations including the Vonhof cooling event (C16n.1n; ~35.8 Ma) hitherto known mainly from the southern oceans.

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A double-curved diverging lens over the flat row-column-addressed (RCA) 2-D array can extend its inherent rectilinear 3-D imaging field of view (FOV) to a curvilinear volume region, which is necessary for applications such as abdominal and cardiac imaging. Two concave lenses with radii of 12.7 and 25.

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The purpose of this work is to investigate compound lenses for row-column-addressed (RCA) ultrasound transducers for increasing the field-of-view (FOV) to a curvilinear volume region, while retaining a flat sole to avoid trapping air between the transducer sole and the patient, which would otherwise lead to unwanted reflections. The primary motivation behind this research is to develop a RCA ultrasound transducer for abdominal or cardiac imaging, where a curvilinear volume region is a necessity. RCA transducers provide 3-D ultrasound imaging with fewer channels than fully-addressed 2-D arrays (2N instead of N), but they have inherently limited FOV.

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Constructing a double-curved row-column-addressed (RCA) 2-D array or applying a diverging lens over the flat RCA 2-D array can extend the imaging field-of-view (FOV) to a curvilinear volume without increasing the aperture size, which is necessary for applications, such as abdominal and cardiac imaging. Extended FOV and low channel count of double-curved RCA 2-D arrays make 3-D imaging possible with equipment in the price range of conventional 2-D imaging. This paper proposes a delay-and-sum beamformation scheme specific to double-curved RCA 2-D arrays and validates its focusing ability based on simulations.

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Calculation of long-term quasi-continuous oxygen saturation (SpO2) levels is highly relevant for critically ill patients. The purpose of this study is therefore to conduct a preliminary investigation of the clinical reliability of long-term photoplethysmography (PPG) recordings obtained from the sternum of patients admitted to the hospital with obstructive lung diseases. Due to the lack of a gold standard reference that is suitable for long-term monitoring without interfering with the patient's activity level, we extracted reliable segments based on knowledge from the basic pulse oximeter theory as well as knowledge about the inherent physiological regulation of the SpO2 levels.

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Simulation and experimental results from 3-D vector flow estimations for a 62 + 62 2-D row-column (RC) array with integrated apodization are presented. A method for implementing a 3-D transverse oscillation (TO) velocity estimator on a 3-MHz RC array is developed and validated. First, a parametric simulation study is conducted, where flow direction, ensemble length, number of pulse cycles, steering angles, transmit/receive apodization, and TO apodization profiles and spacing are varied, to find the optimal parameter configuration.

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The precise reason for the differences and out-of-phase relationship between the abrupt Dansgaard-Oeschger warmings in the Nordic seas and Greenland ice cores and the gradual warmings in the south-central Atlantic and Antarctic ice cores is poorly understood. Termed the bipolar seesaw, the differences are apparently linked to perturbations in the ocean circulation pattern. Here we show that surface and intermediate-depth water south of Iceland warmed gradually synchronously with the Antarctic warming and out of phase with the abrupt warming of the Nordic seas and over Greenland.

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The respiratory rate (RR) is a clinically important vital sign and is a frequently used parameter in the general hospital wards. In current clinical practice, the monitoring of the RR is by manual count of the chest movement for one minute. This paper addresses a new approach where the respiratory rate is extracted using photoplethysmography (PPG) on the chest bone (sternum).

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Traditionally, measurements of the oxygen saturation (SO) has been confound to the extremities. In this study, we therefore investigated the possibility for reliable estimation of clinically relevant SO levels from photoplethysmography (PPG) obtained on the sternum of patients with obstructive airway diseases. We initiated the study with a calibration of a prototype sternal PPG sensor.

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Traditionally, capacitive micromachined ultrasonic transducers (CMUTs) are modeled using the isotropic plate equation, and this leads to deviations between analytical calculations and finite element modeling (FEM). In this paper, the deflection is calculated for both circular and square plates using the full anisotropic plate equation. It is shown that the anisotropic calculations match excellently with FEM, whereas an isotropic approach causes up to 10% deviations in deflection.

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Enhancer of zeste homolog 2 (EZH2) plays an important role in tumor development and progression by interacting with histone and nonhistone proteins. In the current study, we analyzed prevalence and prognostic impact of EZH2 in prostate cancer. EZH2 expression was analyzed by immunohistochemistry on a tissue microarray containing more than 12400 prostate cancer specimens.

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