Publications by authors named "Emily T Martin"

While the number of immunocompromised (IC) individuals continues to rise, the existing literature on influenza vaccine effectiveness (VE) in IC populations is limited. Understanding the vaccine effectiveness (VE) of the seasonal influenza vaccines in immunocompromised (IC) populations remains paramount. Using 2017-2018 US Flu VE Network data, we examined the VE of the 2017-2018 seasonal influenza vaccine against symptomatic influenza in outpatient settings among IC adults.

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  • A study was conducted from September 2022 to April 2023 to evaluate how COVID-19 vaccines affect the risk of infection in children under 5 years old.
  • The results showed no significant difference in infection risk between vaccinated and unvaccinated children.
  • Although the vaccines are effective in preventing severe illness, they may not prevent the actual infection of the virus in young kids.
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SARS-CoV-2 has undergone repeated and rapid evolution to circumvent host immunity. However, outside of prolonged infections in immunocompromised hosts, within-host positive selection has rarely been detected. The low diversity within-hosts and strong genetic linkage among genomic sites make accurately detecting positive selection difficult.

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Background: The 2023-24 U.S. influenza season was characterized by a predominance of A(H1N1)pdm09 virus circulation with co-circulation of A(H3N2) and B/Victoria viruses.

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  • Test-negative design (TND) studies are essential for monitoring the effectiveness of influenza vaccines, but the emergence of vaccines for SARS-CoV-2 and RSV complicates the analysis due to the need for appropriate control selection.
  • A simulation study and secondary analysis of TND estimates from Southeast Michigan showed that RSV prevalence among control groups could potentially bias influenza vaccine effectiveness results, especially when RSV is vaccine-preventable.
  • However, the actual analysis indicated that including RSV cases in the control group did not significantly affect the effectiveness estimates for influenza vaccines, suggesting that current biases are minimal when RSV is not vaccine-preventable.
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While influenza A virus (IAV) antigenic drift has been documented globally, in experimental animal infections, and in immunocompromised hosts, positive selection has generally not been detected in acute infections. This is likely due to challenges in distinguishing selected rare mutations from sequencing error, a reliance on cross-sectional sampling, and/or the lack of formal tests of selection for individual sites. Here, we sequenced IAV populations from 346 serial, daily nasal swabs from 143 individuals collected over three influenza seasons in a household cohort.

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Objectives: Trivalent inactivated influenza vaccine effectiveness was low in a prospective cohort of healthcare personnel (HCP) in Israel from 2016 to 2019. We conducted a randomised immunogenicity trial of quadrivalent recombinant influenza vaccine (RIV4) and standard-dose inactivated influenza vaccine (IIV4) among frequently and infrequently vaccinated previous cohort participants.

Methods: From October 2019 to January 2020, we enrolled and randomly allocated HCP from two Israeli hospitals to receive IIV4 or RIV4.

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  • The study investigated the relationship between body mass index (BMI) and the effectiveness of influenza vaccines (VE) over seven seasons in adults and children.
  • Researchers analyzed data from over 40,000 patients, comparing vaccination status and BMI categories (normal, overweight, and obesity).
  • Findings showed that higher BMI did not significantly affect vaccine effectiveness against outpatient influenza, with VE rates remaining consistent across different BMI categories.
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  • The study investigates the evolutionary dynamics of the influenza A virus (IAV) by analyzing daily nasal swabs from 143 individuals over three flu seasons, identifying variations in the virus within hosts.
  • Researchers found that while most mutations were subject to purifying selection and occurred at low frequencies, children exhibited slightly faster evolutionary rates compared to older age groups.
  • Positive selection was infrequently detected, with only a small percentage of mutations showing consistent advantageous evolution, suggesting that within-host IAV populations primarily experience genetic drift rather than strong selection pressure.
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Background: Viral respiratory illnesses are the most common acute illnesses experienced and generally follow a predicted pattern over time. The SARS-CoV-2 pandemic interrupted that pattern.

Methods: The HIVE (Household Influenza Vaccine Evaluation) study was established in 2010 to follow a cohort of Southeast Michigan households over time.

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  • The study assessed the effectiveness of the updated 2023-2024 COVID-19 vaccine against hospitalization for two variant lineages, XBB and JN, in hospitalized patients across 26 hospitals in the U.S. between October 2023 and March 2024.
  • The results indicated a vaccine effectiveness (VE) of 54.2% against XBB and 32.7% against JN, suggesting that the JN lineage may have some level of immune escape.
  • However, the severity of cases with the JN lineage was not significantly worse compared to those with the XBB lineage, indicating similar risks of severe outcomes like ICU admission and death.
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BackgroundHealthcare personnel (HCP) are at high risk for respiratory infections through occupational exposure to respiratory viruses.AimWe used data from a prospective influenza vaccine effectiveness study in HCP to quantify the incidence of acute respiratory infections (ARI) and their associated presenteeism and absenteeism.MethodsAt the start and end of each season, HCP at two Israeli hospitals provided serum to screen for antibodies to influenza virus using the haemagglutination inhibition assay.

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  • The study examined the relationship between binding antibody (bAb) levels measured within 5 days of COVID-19 symptoms and the likelihood of testing positive for the virus in symptomatic patients across 7 states.
  • Out of 2018 patients, 662 tested positive for COVID-19, showing lower antibody levels compared to those who tested negative, particularly during the Delta and Omicron variants.
  • Higher concentrations of antibodies were linked to significantly lower odds of contracting COVID-19, indicating the importance of antibody levels in providing protection during acute illness.
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Background: Respiratory syncytial virus (RSV)-associated lower respiratory tract infection contributes significantly to morbidity/mortality worldwide in low birthweight (LBW) infants (<2500 g). Studies have demonstrated decreased maternal immunoglobulin G (IgG) transfer of various antibodies to LBW infants. We aimed to evaluate naturally acquired RSV anti-prefusion F protein (anti-preF) antibody transfer in pregnancies with LBW versus normal birthweight (NBW) infants.

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We describe humoral immune responses in 105 ambulatory patients with laboratory-confirmed SARS-CoV-2 Omicron variant infection. In dried blood spot (DBS) collected within 5 days of illness onset and during convalescence, we measured binding antibody (bAb) against ancestral spike protein receptor binding domain (RBD) and nucleocapsid (N) protein using a commercial multiplex bead assay. Geometric mean bAb concentrations against RBD increased by a factor of 2.

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Background: The 2022-23 US influenza season peaked early in fall 2022.

Methods: Late-season influenza vaccine effectiveness (VE) against outpatient, laboratory-confirmed influenza was calculated among participants of the US Influenza VE Network using a test-negative design.

Results: Of 2561 participants enrolled from December 12, 2022 to April 30, 2023, 91 laboratory-confirmed influenza cases primarily had A(H1N1)pdm09 (6B.

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  • This study evaluated the prevalence of respiratory syncytial virus (RSV) in patients with medically attended acute respiratory illnesses (MAARI) over three seasons, shedding light on its commonality compared to influenza.
  • Through the Michigan Ford Influenza Vaccine Effectiveness study, 4,442 participants aged 6 months and older were tested for RSV and influenza, revealing that 9.9% were positive for RSV, particularly common in children aged 6 months to 4 years.
  • The findings highlighted that adults with RSV-MAARI had higher multimorbidity indices than those with influenza, emphasizing the need for better awareness and clinical decision-making regarding RSV vaccination strategies, especially in older adults.
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Studies have reported that prior-season influenza vaccination is associated with higher risk of clinical influenza infection among vaccinees. This effect might arise from incomplete consideration of within-season waning and recent infection. Using data from the US Flu Vaccine Effectiveness Network (2011-2012 to 2018-2019 seasons), we found that repeat vaccinees were vaccinated earlier in a season by 1 week.

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Importance: On June 21, 2023, the Centers for Disease Control and Prevention recommended the first respiratory syncytial virus (RSV) vaccines for adults aged 60 years and older using shared clinical decision-making. Understanding the severity of RSV disease in adults can help guide this clinical decision-making.

Objective: To describe disease severity among adults hospitalized with RSV and compare it with the severity of COVID-19 and influenza disease by vaccination status.

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  • - The study investigated the long-term disability symptoms of individuals who had mild to moderate COVID-19-like illness, comparing those who tested positive for SARS-CoV-2 with those who tested negative before widespread vaccination.
  • - Participants completed surveys over several months to assess their health status, including aspects like physical function, fatigue, and dyspnea, with 2712 adults enrolled but only 650 completing the final follow-up.
  • - Results showed that while SARS-CoV-2-positive individuals reported more acute illness symptoms like fever, their self-reported disability levels were similar to those who tested negative after 2-7 months, indicating no significant long-term differences between the two groups.
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  • In September 2023, the CDC recommended the updated 2023-2024 monovalent XBB.1.5 COVID-19 vaccine for everyone aged 6 months and older to help prevent COVID-19, including severe cases.
  • An analysis of vaccine effectiveness (VE) found that during the first 59 days after vaccination, the VE against COVID-19-related emergency department visits was 51%, which dropped to 39% after 60-119 days.
  • The updated COVID-19 vaccine showed increased protection, with VE against hospitalizations being 52% and 43% between two networks, supporting CDC's guidelines for vaccination.
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In the United States, annual influenza vaccination is recommended for all persons aged ≥6 months. Using data from four vaccine effectiveness (VE) networks during the 2023-24 influenza season, interim influenza VE was estimated among patients aged ≥6 months with acute respiratory illness-associated medical encounters using a test-negative case-control study design. Among children and adolescents aged 6 months-17 years, VE against influenza-associated outpatient visits ranged from 59% to 67% and against influenza-associated hospitalization ranged from 52% to 61%.

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  • * Limited data exists regarding the effectiveness of these vaccines, prompting the need for this research to understand their impact on this age group and inform vaccination strategies.
  • * The analysis involved testing nasal swabs for the virus and comparing infection rates between vaccinated participants and those who were unvaccinated or had received only monovalent vaccine doses, while controlling for various demographic and health factors.
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